Evaluation on test set.
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Evaluation of optimal alignment parameters on 5 million reads from chromosomes 1-22, excluding 21. Runtime and memory caps were set at 10 CPU days and 16G, respectively. Processes exceeding these limits were killed and partial results were not evaluated. Superscripts indicate the following:1Runtime and memory consumption could not be recorded accurately because of the modular structure of the application which makes the automated evaluation of all parameter combinations difficult;2Supports only single-end alignment;3Exceeded the memory cap of 16G;4Exceeded the runtime cap of 10 CPU days.
针对来自1号至22号染色体(不含21号染色体)的500万条测序读段(reads)开展最优比对参数的评估。本次实验分别将运行时长上限与内存使用上限设定为10 CPU天与16G,超出上述限制的进程将被终止,且未对相关部分结果进行评估。上标含义如下:1 由于应用程序采用模块化结构,难以自动完成全部参数组合的评估,因此无法准确记录运行时与内存消耗情况;2 仅支持单端序列比对;3 超出16G内存上限;4 超出10 CPU天运行时长上限。



