merge_CLCv6_SNP_files_with_SAM_files script

This python script merges the SNP detection results of CLC(version6 or higher) with the information in SAM files from CLC version 6 or higher. This script requires samtools. The user must specify the path to the samtools software path as well as the reference file name on lines 438 and 439 of this script.

本Python脚本可将CLC（版本6及以上）的单核苷酸多态性（Single Nucleotide Polymorphism, SNP）检测结果，与CLC版本6及以上生成的SAM格式文件中的信息进行整合。本脚本依赖samtools工具。用户需在本脚本的第438行与第439行中，指定samtools工具的软件路径以及参考基因组文件名。