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pVHL:EloB:EloC in complex with (2S,4R)-1-((S)-2-((S)-2-acetamido-3-phenylpropanamido)-3,3-dimethylbutanoyl)-4-hydroxy-N-(4-(4-methylthiazol-5-yl)benzyl)pyrrolidine-2-carboxamide (ligand 14)

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Protein Data Bank Japan2024-10-23 更新2026-03-21 收录
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pVHL:EloB:EloC in complex with (2S,4R)-1-((S)-2-((S)-2-acetamido-3-phenylpropanamido)-3,3-dimethylbutanoyl)-4-hydroxy-N-(4-(4-methylthiazol-5-yl)benzyl)pyrrolidine-2-carboxamide (ligand 14) Descriptor: N-acetyl-L-phenylalanyl-3-methyl-L-valyl-(4R)-4-hydroxy-N-[4-(4-methyl-1,3-thiazol-5-yl)benzyl]-L-prolinamide, Transcription elongation factor B polypeptide 1, Transcription elongation factor B polypeptide 2, ... Authors: Gadd, M.S, Galdeano, C, van Molle, I, Ciulli, A. Deposit date: 2014-08-27 Release date: 2014-09-10 Last modified: 2024-10-23 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Structure-Guided Design and Optimization of Small Molecules Targeting the Protein-Protein Interaction between the von Hippel-Lindau (VHL) E3 Ubiquitin Ligase and the Hypoxia Inducible Factor (HIF) Alpha Subunit with in Vitro Nanomolar Affinities. J.Med.Chem., 57, 2014

本数据集收录了pVHL、EloB与EloC组成的复合物与(2S,4R)-1-((S)-2-((S)-2-乙酰氨基-3-苯基丙酰胺基)-3,3-二甲基丁酰基)-4-羟基-N-(4-(4-甲基噻唑-5-基)苄基)吡咯烷-2-甲酰胺(配体14)结合的三维结构数据。复合物的分子描述符为:N-乙酰-L-苯丙氨酰基-3-甲基-L-缬氨酰基-(4R)-4-羟基-N-[4-(4-甲基-1,3-噻唑-5-基)苄基]-L-脯氨酰胺;涉及的蛋白包括转录延伸因子B多肽1(Transcription elongation factor B polypeptide 1,即EloB)、转录延伸因子B多肽2(Transcription elongation factor B polypeptide 2,即EloC)等。本数据集作者为Gadd, M.S.、Galdeano, C.、van Molle, I.、Ciulli, A.;数据提交日期为2014-08-27,发布日期为2014-09-10,最后修改日期为2024-10-23。结构解析采用X射线衍射法,分辨率为2.1 Å。相关引用文献:《Structure-Guided Design and Optimization of Small Molecules Targeting the Protein-Protein Interaction between the von Hippel-Lindau (VHL) E3 Ubiquitin Ligase and the Hypoxia Inducible Factor (HIF) Alpha Subunit with in Vitro Nanomolar Affinities》,发表于《药物化学杂志(J. Med. Chem.)》,2014年,第57卷。
创建时间:
2014-08-27
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