SARS-CoV-2 Viral Samples and Reference Genome for Galaxy Training Network SARS with Galaxy on AnVIL Tutorial

In the lab activity, we'll see if there are genomic differences in the collected sample compared to the original SARS-CoV-2 genome (the reference). We need three files to do this: <strong>SARS-CoV-2_reference_genome.fasta</strong> : the reference genome <strong>VA_sample_forward_reads.fastq.gz</strong>: 1 of 2 raw read data files <strong>VA_sample_reverse_reads.fastq.gz</strong>: 2 of 2 raw read data files The sample for this activity was derived from data collected at Virginia Commonwealth University in Richmond, VA. The researchers collected the sample with the goal of being able to track the spread and evolution of this virus state-wide, nationally, and internationally. You can download the original data here. You can download the reference genome here.本次实验活动旨在比对所采集样本与原始SARS-CoV-2基因组（参考基因组）之间的基因组差异。本次分析需使用以下三个文件： <strong>SARS-CoV-2_reference_genome.fasta</strong>：参考基因组文件； <strong>VA_sample_forward_reads.fastq.gz</strong>：两份原始测序读段数据文件之一； <strong>VA_sample_reverse_reads.fastq.gz</strong>：两份原始测序读段数据文件之二。 本次活动所用样本数据源自弗吉尼亚州里士满的弗吉尼亚联邦大学采集的实验数据，研究人员采集该样本的目标是在州内、全国乃至全球范围内追踪该病毒的传播与演化态势。您可在此处下载原始数据，亦可在此处下载参考基因组。