Anopheles stephensi APL1 SHAMAN repository

This repository includes all data files necessary to reproduce the results of bacterial differential abundance analysis in Anopheles stephensi depleted of APL1 (Mitri et al.) using the SHAMAN workflow. Step by step SHAMAN guide in "How to use SHAMAN workflow".本仓库涵盖了利用SHAMAN工作流对APL1基因敲除的斯氏按蚊（Anopheles stephensi）进行细菌差异丰度分析、并复现Mitri等（Mitri et al.）相关研究成果所需的全部数据文件。SHAMAN工作流的分步操作指南详见"How to use SHAMAN workflow"。