Sample numbers, barcode information, primer information and project name from bacteria samples collected in the Caribbean during 2013 (Contagious coral diseases project)
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<p>This dataset contains sample information, barcode information, primer information and the project name.</p>
<p>Coral disease transmission experiments were completed for dark-spot syndrome on Sidereastrea siderea and yellow-band disease on Orbicella faveolata, as described in Randall et al. 2016. Following experimentation, microbial communities were extracted from tissue samples to determine whether any potential pathogen may have transmitted from healthy to exposed corals. Microbial communities on healthy corals were compared with diseased corals to identify any potential pathogens.</p>
<p>Experimental diseased and healthy corals were sampled and their microbial communities were analyzed using 454 Illumina pyrosequencing of the amplified 16S rRNA gene on the V1-V3 hypervariable region.</p>
本数据集包含样本信息、条形码(barcode)信息、引物(primer)信息以及项目名称。
本数据集针对星孔珊瑚(Sidereastrea siderea)的黑斑综合征与团块珊瑚(Orbicella faveolata)的黄带病完成了珊瑚疾病传播实验,实验细节如Randall等人2016年的研究所述。实验结束后,研究人员从珊瑚组织样本中提取微生物群落,以确定是否存在潜在病原菌从健康珊瑚传播至暴露珊瑚体内。通过对比健康珊瑚与患病珊瑚的微生物群落,以甄别潜在病原菌。
研究人员对实验用患病及健康珊瑚进行采样,并针对扩增得到的16S rRNA基因V1-V3高变区,采用454 Illumina焦磷酸测序技术对其微生物群落展开分析。
创建时间:
2025-03-09



