Additional file 1 of FiNGS: high quality somatic mutations using filters for next generation sequencing
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Additional file 1 Supplementary Table 1: Filters included in FiNGS, with descriptions and rationales for each of them. Also includes default values in FiNGS, ICGC recommendations and FPfilter values. Using a subset of the validation data, we calculated the recall, precision and F1 scores for each set of parameters in each filter and report the parameter with the highest F1 score.
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2021-02-19
