Additional file 2 of The draft genome of Andean Rhodopseudomonas sp. strain AZUL predicts genome plasticity and adaptation to chemical homeostasis

Additional file 2: (Table S1):Table S1-1. Results of genome quality analysis of the 39 Rhodopseudomonas strains used in this work, obtained using the Genome Annotation service at PATRIC. Table S1-2. Full clustering analysis of the 31 strains of Rhodopseudomonas with Roary, using 70% identity cut-off and the ‘do not split paralogs’ option. Table S1-3. Gene annotation of the Rhodopseudomonas genome according to Prokka and Roary (split paralogs option). Table S1-4. Gene count of selected subsystems from the PATRIC comparative pathway output in the 31 Rhodopseudomonas strains.附加文件2：（表S1）： 表S1-1 本研究所用39株红假单胞菌（Rhodopseudomonas）的基因组质量分析结果，该结果通过PATRIC的基因组注释服务获取。 表S1-2 采用Roary工具，以70%序列一致性为阈值并启用“不拆分旁系同源基因”参数，对31株红假单胞菌进行完整聚类分析的结果。 表S1-3 基于Prokka与Roary工具（启用拆分旁系同源基因参数）得到的红假单胞菌基因组基因注释结果。 表S1-4 31株红假单胞菌中，PATRIC比较代谢通路输出结果内选定子系统的基因计数统计结果。