five

Supp_File_10

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Mendeley Data2024-01-31 更新2024-06-29 收录
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http://datadryad.org/resource/doi:10.5061/dryad.633bk/11
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SUPPLEMENTARY FILE 10. Excel file with six sheets showing associations between ABBA and BABA-like sites with gene ontology (GO) terms from the zebra finch genome. The first three sheets refer to ABBA-like sites; the last three sheets refer to BABA-like sites. Sheets 1 and 4 give associations with GO terms related to cellular components (“cc”), sheets 2 and 5 refer to GO terms related to biological processes (“bp”), and sheets 3 and 6 refer to GO terms related to molecular function (“mf”). In each sheet, GO terms are accompanied by the number of zebra finch genes they are annotated to (“annotated”), followed by the number of ABBA or BABA-linked genes they are annotated to (“significant”), followed by the number of ABBA or BABA-linked genes they would be expected to be annotated to by chance (“expected”), followed by the corrected p value for their over-representation in the ABBA or BABA-linked gene set (“corrected”). The only gene set showing significant (p < 0.05) over-representation of any GO term is the ABBA set for cellular components (sheet 1).

补充文件10:该Excel文件包含6个工作表,展示了斑胸草雀(zebra finch)基因组中ABBA位点与类BABA位点同基因本体(Gene Ontology, GO)术语之间的关联关系。其中前3个工作表对应类ABBA位点,后3个工作表对应类BABA位点。工作表1与工作表4对应与细胞组分(cellular components, cc)相关的GO术语,工作表2与工作表5对应与生物过程(biological processes, bp)相关的GO术语,工作表3与工作表6对应与分子功能(molecular function, mf)相关的GO术语。每个工作表中,GO术语后依次附带其注释的斑胸草雀基因数(标注为"annotated")、与之关联的ABBA或类BABA基因数(标注为"significant")、随机预期注释到的ABBA或类BABA基因数(标注为"expected"),以及其在ABBA或类BABA关联基因集合中过度富集的校正p值(标注为"corrected")。在所有基因集合中,仅细胞组分对应的ABBA基因集合(工作表1)存在显著(p < 0.05)的GO术语过度富集现象。
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2024-01-31
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