Data from: Differential gene expression in red imported fire ant (Solenopsis invicta) (Hymenoptera: Formicidae) larval and pupal stages
收藏agdatacommons.nal.usda.gov2024-07-24 更新2025-03-23 收录
下载链接:
https://agdatacommons.nal.usda.gov/articles/dataset/Data_from_Differential_gene_expression_in_red_imported_fire_ant_Solenopsis_invicta_Hymenoptera_Formicidae_larval_and_pupal_stages/24662730/1
下载链接
链接失效反馈官方服务:
资源简介:
12 files (6 sets of paired Illumina FASTQ files) transcriptomes (expressed genes) of the fourth (final) larval and early (white) pupal stages of Solenopsis invicta from Mississippi Delta. Resources in this dataset:Resource Title: RNA-seq Larva sample Colony 1. File Name: A01L4_1.zipResource Description: This is the first of the paired samples; the total set includes 3 paired Illumina files from larvae, and 3 paired Illumina files from pupae. Colony 1 samples are from 4th instar larvae: paired Illumina fastq files A01L4_1 and A01L4_2; and white pupae: X01wp_1 and X01wp_2.Resource Software Recommended: A01L4_1,url: www.cyverse.org Resource Title: RNA-seq Larva sample Colony 1. File Name: A01L4_2.zipResource Description: This is the second of the paired samples for larvae from Colony 1. Colony 1 samples are from 4th instar larvae: paired Illumina fastq files A01L4_1 and A01L4_2; and white pupae: X01wp_1 and X01wp_2.Resource Software Recommended: Any assembly program that handles paired Illumina files,url: www.cyverse.org Resource Title: RNA-seq pupa sample Colony 1. File Name: X01wp_1.zipResource Description: This is the first of the paired samples. Colony 1 samples are from 4th instar larvae: paired Illumina fastq files A01L4_1 and A01L4_2; and white pupae: X01wp_1 and X01wp_2.Resource Software Recommended: Any assembly program that handles paired Illumina files,url: www.cyverse.org Resource Title: RNA-seq pupa sample Colony 1.. File Name: X01wp_2.zipResource Description: This is the second of the paired samples. Colony 1 samples are from 4th instar larvae: paired Illumina fastq files A01L4_1 and A01L4_2; and white pupae: X01wp_1 and X01wp_2.Resource Software Recommended: Any assembly program that can use Illumina paired files,url: www.cyverse.org Resource Title: RNA-seq larva sample Colony 2. File Name: B02L4_2.zipResource Description: This is the second of the paired samples from Colony 2.Resource Software Recommended: Any assembly program that handles Illumina paired files for input,url: www.cyverse.org Resource Title: RNA-seq larva sample Colony 2. File Name: B02L4_1.zipResource Description: This is the first of the paired larva samples. Colony 2 samples include larva paired Illumina files B02L4_1 and B02L4_2, and paired pupa files Y02wp_1 and Y02wp_2.Resource Software Recommended: Any assembly program that handles paired Illumina files,url: www.cyverse.org Resource Title: RNA-seq pupa sample Colony 2. File Name: Y02wp_1.zipResource Description: This is the first of the paired pupa files. The set includes Y02wp_1 and Y02wp_2.Resource Software Recommended: Any assembly program that accepts Illumina paired reads,url: www.cyverse.org Resource Title: RNA-seq pupa sample Colony 2. File Name: Y02wp_2.zipResource Description: This is the second of the paired samples; the Colony 2 pupa samples are Y02wp_1 and Y02wp_2.Resource Software Recommended: Any assembly program that accepts Illumina paired data files,url: www.cyverse.org Resource Title: RNA-seq pupa sample Colony 3. File Name: Z03wp_1.zipResource Description: This is the first of paired sample files: the set includes Z03wp_1 and Z03wp_2.Resource Title: RNA-seq pupa sample Colony 3. File Name: Z03wp_2.zipResource Description: This is the second of the paired sample files: the set includes Z03wp_1 and Z03wp_2Resource Title: RNA-seq larva sample Colony 3. File Name: C03L4_1.zipResource Description: This is the first of the paired sample files: the set includes C03L4_1 and C03L4_2.Resource Title: RNA-seq larva sample Colony 3. File Name: C03L4_2.zipResource Description: This is the second of the paired sample files: the set includes C03L4_1 and C03L4_2
本数据集包含12个文件,其中6组配对Illumina FASTQ文件分别对应第四(最终)幼虫阶段和早期(白色)蛹阶段的Solenopsis invicta转录组(表达基因)。数据集资源包括:
资源标题:RNA-seq幼虫样本殖民地1
文件名:A01L4_1.zip
资源描述:此为配对样本的第一部分;全套包含来自幼虫的3个配对Illumina文件和来自蛹的3个配对Illumina文件。殖民地1样本来自第四龄幼虫:配对Illumina fastq文件A01L4_1和A01L4_2;以及白色蛹:X01wp_1和X01wp_2。
推荐软件:适用于处理配对Illumina文件的任何组装程序,链接:www.cyverse.org
资源标题:RNA-seq幼虫样本殖民地1
文件名:A01L4_2.zip
资源描述:此为殖民地1幼虫配对样本的第二部分。
殖民地1样本来自第四龄幼虫:配对Illumina fastq文件A01L4_1和A01L4_2;以及白色蛹:X01wp_1和X01wp_2。
推荐软件:适用于处理配对Illumina文件的任何组装程序,链接:www.cyverse.org
资源标题:RNA-seq蛹样本殖民地1
文件名:X01wp_1.zip
资源描述:此为配对样本的第一部分。
殖民地1样本来自第四龄幼虫:配对Illumina fastq文件A01L4_1和A01L4_2;以及白色蛹:X01wp_1和X01wp_2。
推荐软件:适用于处理配对Illumina文件的任何组装程序,链接:www.cyverse.org
资源标题:RNA-seq蛹样本殖民地1
文件名:X01wp_2.zip
资源描述:此为配对样本的第二部分;殖民地1的蛹样本为X01wp_1和X01wp_2。
推荐软件:适用于使用Illumina配对文件的任何组装程序,链接:www.cyverse.org
资源标题:RNA-seq幼虫样本殖民地2
文件名:B02L4_2.zip
资源描述:此为配对样本的第二部分。
推荐软件:适用于处理Illumina配对文件输入的任何组装程序,链接:www.cyverse.org
资源标题:RNA-seq幼虫样本殖民地2
文件名:B02L4_1.zip
资源描述:此为配对幼虫样本的第一部分。
殖民地2样本包括幼虫配对Illumina文件B02L4_1和B02L4_2,以及配对蛹文件Y02wp_1和Y02wp_2。
推荐软件:适用于处理配对Illumina文件的任何组装程序,链接:www.cyverse.org
资源标题:RNA-seq蛹样本殖民地2
文件名:Y02wp_1.zip
资源描述:此为配对蛹文件的第一部分。
该套件包含Y02wp_1和Y02wp_2。
推荐软件:接受Illumina配对读取的任何组装程序,链接:www.cyverse.org
资源标题:RNA-seq蛹样本殖民地2
文件名:Y02wp_2.zip
资源描述:此为配对样本的第二部分;殖民地2的蛹样本为Y02wp_1和Y02wp_2。
推荐软件:接受Illumina配对数据文件的任何组装程序,链接:www.cyverse.org
资源标题:RNA-seq蛹样本殖民地3
文件名:Z03wp_1.zip
资源描述:此为配对样本文件的第一部分:该套件包含Z03wp_1和Z03wp_2。
资源标题:RNA-seq蛹样本殖民地3
文件名:Z03wp_2.zip
资源描述:此为配对样本文件的第二部分:该套件包含Z03wp_1和Z03wp_2。
资源标题:RNA-seq幼虫样本殖民地3
文件名:C03L4_1.zip
资源描述:此为配对样本文件的第一部分:该套件包含C03L4_1和C03L4_2。
资源标题:RNA-seq幼虫样本殖民地3
文件名:C03L4_2.zip
资源描述:此为配对样本文件的第二部分:该套件包含C03L4_1和C03L4_2。
提供机构:
agdatacommons.nal.usda.gov



