遇见数据集

Genome Annotation of Arsenophonus from Apis mellifera

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Figshare2022-04-07 更新2026-04-08 收录
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Annotation table for genome sequence of <i>Arsenophonus</i> derived from <i>Apis mellifera</i> honey bees (Genbank accessions CP084222 – CP084228). <br>Genome annotation was performed with the NCBI Prokaryotic Genome Annotation Pipeline.<br>Column A: locus identifier tagColumn B: Feature (CDS, rRNA, tRNA)Column C: attributes. Free text: pseudo= likely pseudogeneColumn D: sequence type (main chromosome vs plasmid)Column E: plasmid identified (if plasmid) - 1 to 6.Column F: Start point in genome (base #)Column G: End point in genome (base #)Column H: Strand (+/-)Column I: Product accession # (if protein coding)Column J: Gene nameColumn K: Gene symbolColumn L: gene length (bp)Column M: product length (aa)Column N: Kegg annotation identifier.Column O: Predicted biosynthesis function, as predicted by Anti-SMASH.Column P: pfam domains identified (by identifier)Column Q: pfam domains identified (by name)<br><br>

源自西方蜜蜂(Apis mellifera)的阿尔塞诺丰菌属(Arsenophonus)基因组序列注释表(GenBank登录号:CP084222 – CP084228)。<br>本基因组注释采用美国国家生物技术信息中心(National Center for Biotechnology Information, NCBI)原核基因组注释流程完成。<br>A列:基因座标识符标签<br>B列:特征类型(编码序列(Coding Sequence, CDS)、核糖体RNA(ribosomal RNA, rRNA)、转运RNA(transfer RNA, tRNA))<br>C列:属性信息。自由文本注释:pseudo=疑似假基因<br>D列:序列类型(主染色体或质粒)<br>E列:质粒标识(若为质粒),取值范围1至6<br>F列:基因组起始位点(碱基编号)<br>G列:基因组终止位点(碱基编号)<br>H列:链方向(+/-)<br>I列:产物登录号(若为蛋白编码序列)<br>J列:基因名称<br>K列:基因符号<br>L列:基因长度(bp,碱基对)<br>M列:产物长度(aa,氨基酸)<br>N列:京都基因与基因组百科全书(Kyoto Encyclopedia of Genes and Genomes, KEGG)注释标识符<br>O列:由Anti-SMASH预测的生物合成功能<br>P列:以标识符形式鉴定到的Pfam(蛋白质家族数据库)结构域<br>Q列:以名称形式鉴定到的Pfam结构域<br><br>

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2022-04-07
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