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AMBER-ii: New Combining Rules and Force Field for Perfluoroalkanes

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acs.figshare.com2023-05-31 更新2025-03-25 收录
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https://acs.figshare.com/articles/dataset/AMBER_ii_New_Combining_Rules_and_Force_Field_for_Perfluoroalkanes/2107234/1
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A molecular mechanics force field of the AMBER/OPLS family for perfluoroalkanes, noble gases, and their mixtures with alkanes has been proposed. We had to abandon the traditional Lorentz–Berthelot combining rules for the Lennard-Jones potential to be able to uniformly describe these substance classes and their mixtures. Instead, the Waldman-Hagler rules developed for noble gases were used for all of these elements except hydrogen. Hydrogen is considered to be a particular substance to which the usual Lorentz–Berthelot rules are applied. The proposed rules have little effect on the organic chemistry of H, C, N, and O elements but make it compliant with the chemistry of heavy elements. Because of assigning a relatively high partial charge of −0.37e to fluorine atoms, the new force field reproduces the mutual insolubility of higher liquid alkanes and perfluoroalkanes.

本研究提出了适用于全氟烷烃、稀有气体及其与烷烃混合物的 AMBER/OPLS 家族分子力学力场。鉴于需统一描述这些物质类别及其混合物,我们不得不摒弃传统的 Lorentz-Berthelot 结合规则以适用于 Lennard-Jones 势。因此,我们采用了专为稀有气体开发的 Waldman-Hagler 规则,适用于除氢以外的所有这些元素。氢被认为是一种特殊的物质,对其适用常规的 Lorentz-Berthelot 规则。所提出的规则对 H、C、N 和 O 元素的有机化学影响微乎其微,但使得力场与重元素化学相吻合。由于对氟原子赋予相对较高的部分电荷(-0.37e),新的力场能够再现高液态烷烃与全氟烷烃的互溶性。
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