遇见数据集

Catalog of metagenome-assembled bacterial genomes from Antarctic endolithic communities

收藏
Zenodo2022-11-25 更新2026-05-25 收录
数据链接:
官方服务:

资源简介:

The dataset consists of 2 rar archives and 2 files ( tab-separated values ). Here is a brief summary of their contents: <strong>MAGs_taxonomy: </strong>GTDB classification for each MAG. <strong>MAGs_genome_info: </strong>genome size, completeness, contamination, length, N50. <strong>MAGs - candidate species: </strong>high quality (HQ) and medium quality (MQ) bacterial metagenome assembled genomes. <strong>MAGs_Annotation: </strong>EggNOG annotation files. For each MAG, the following files are included: eggnog.emapper.annotations: the final EggNOG annotation; eggnog.emapper.hmm_hits: list of significant hits to eggNOG Orthologous Groups eggnog.emapper.seed_orthologs: best match of each query within the best Orthologous Group (OG) reported in the eggnog.emapper.hmm_hits file<strong>.</strong>

本数据集包含2个RAR压缩归档文件与2个制表符分隔值(tab-separated values)文件。以下为各文件内容的简要概述: **MAGs_taxonomy:** 对应每一个宏基因组组装基因组(Metagenome-Assembled Genome,MAG)的基因组分类数据库(Genome Taxonomy Database,GTDB)分类注释信息。 **MAGs_genome_info:** 包含基因组大小、完整度、污染度、序列长度以及N50组装指标。 **MAGs - candidate species:** 高质量(High Quality,HQ)与中等质量(Medium Quality,MQ)的细菌宏基因组组装基因组集合。 **MAGs_Annotation:** EggNOG注释文件集。针对每个MAG,包含以下文件: - `eggnog.emapper.annotations`:最终的EggNOG注释结果文件; - `eggnog.emapper.hmm_hits`:与eggNOG同源基因簇(Orthologous Groups,OG)的显著比对结果列表; - `eggnog.emapper.seed_orthologs`:在`eggnog.emapper.hmm_hits`文件所报告的最佳同源基因簇中,每条查询序列的最佳匹配结果。

提供机构:
Zenodo
创建时间:
2022-11-25
二维码
社区交流群
二维码
科研交流群
商业服务