An Open-Source Tool Adapted to Assess Vessel Strike Risk to Whales Near an Active Seaport

This repository contains the data and code associated with the manuscript: An Open-Source Tool Adapted to Assess Vessel Strike Risk by Vessel Type for Endangered Whales in San Francisco Bay Authors: Rebekah S. Lane, Max Czapanskiy, Thomas J. Moore, William Keener, Lisabet M. Hortensius, Jerry Davis, Tim M. Markowitz, Ellen Hines Journal: Marine Pollution Bulletin, in submission DOI: to be updated upon acceptanceData is published on Zenodo. Data includes a study area shapefile, AIS data by month and year (available also for download at marinecadastre.gov), and anonymized whale sightings data curated by The Marine Mammal Center.Code is published on Github at https://github.com/beks0922/SFBay_Mn_HRA. This code produces the inputs necessary to run the InVEST Habitat Risk Assessmentmodel. (See user guide here http://releases.naturalcapitalproject.org/invest-userguide/latest/en/habitat_risk_assessment.html).本仓库包含与下述稿件配套的数据与代码： 《适配旧金山湾濒危鲸类的开源工具：按船舶类型评估船舶撞击风险》 作者：丽贝卡·S·莱恩（Rebekah S. Lane）、马克斯·扎潘斯基（Max Czapanskiy）、托马斯·J·摩尔（Thomas J. Moore）、威廉·基纳（William Keener）、莉萨贝特·M·滕修斯（Lisabet M. Hortensius）、杰里·戴维斯（Jerry Davis）、蒂姆·M·马科维茨（Tim M. Markowitz）、艾伦·海因斯（Ellen Hines） 期刊：《Marine Pollution Bulletin》（海洋污染通报），已投稿待刊 DOI：将在稿件录用后更新 相关数据已发布于Zenodo平台，包含研究区域形状文件（shapefile）、按年月分类的自动识别系统（Automatic Identification System, AIS）数据（该数据亦可从marinemcadastre.gov下载获取），以及由海洋哺乳动物中心（The Marine Mammal Center）整理的匿名化鲸类目击数据。 配套代码已发布于GitHub平台，仓库地址为https://github.com/beks0922/SFBay_Mn_HRA。该代码可生成运行InVEST栖息地风险评估模型（InVEST Habitat Risk Assessment Model）所需的输入参数，具体可参考其用户指南：http://releases.naturalcapitalproject.org/invest-userguide/latest/en/habitat_risk_assessment.html