Introduction to bulk RNAseq analysis: supplementary material
收藏资源简介:
Vampirium setup This archive contains materials (datasets, exercises and slides, etc) used for the Introduction to bulk RNAseq analysis workshop taught at the University of Copenhagen by the Center for Health Data Science (HeaDS). The course repo can be found on Github: Assignments.zip contains exercises for the preprocessing part of the course, like fastqc and multiqc examples of bulk RNAseq experiments Data.zip contains count matrices (both traditional counts and salmon pseudocounts), as well as sample metadata (samplesheet.csv) and backup results from the preprocessing pipeline. Notes.zip contains supplementary materials such as extra pdfs for more information on bulk RNAseq technology. Slides.zip contains all the slides used in the workshop. raw_reads.zip contains the raw reads from the bulk RNAseq experiment (10.1016/j.celrep.2014.10.054) used in this course.
Vampirium setup 本归档包含由哥本哈根大学健康数据科学中心(Center for Health Data Science,缩写HeaDS)开设的批量RNA测序(bulk RNAseq)分析入门讲习班的相关资料,涵盖数据集、练习课件等。本课程的代码仓库托管于Github: Assignments.zip:包含课程预处理环节的练习内容,例如批量RNA测序实验的FastQC与MultiQC示例。 Data.zip:包含计数矩阵(含传统计数与salmon伪计数)、样本元数据文件samplesheet.csv,以及预处理流程的备份结果。 Notes.zip:包含补充学习材料,例如用于深入了解批量RNA测序技术的额外PDF文档。 Slides.zip:包含本次讲习班所用的全部课件。 raw_reads.zip:包含本课程所用批量RNA测序实验的原始测序reads,该实验的相关文献DOI为10.1016/j.celrep.2014.10.054。



