Additional file 9 of Smarcad1 mediates microbiota-induced inflammation in mouse and coordinates gene expression in the intestinal epithelium

Additional file 9: Table S8. Differential chromatin accessibility MACS-peaks (300 bp fragment size) identified with the EdgeR test (cut-off FDR < 0.00001) on comparison of ATAC-seq datasets from WT and Smarcad1-KO (Villin-cre mediated) small intestinal whole crypt isolates. Table contents: MACS-peak chromosomal position, closest gene (5 kbp cut-off) with distance and annotation, EdgeR FDR (Benjamini-Hochberg corrected) and quantitation (n = 3, log2, read counts normalized to largest data store) in WT/KO datasets by sample.