遇见数据集

PRScomp reference genoptype dataset

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Figshare2023-10-19 更新2026-04-08 收录
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PRScomp reference genoptype dataset contains genotype data of the 1KG3 and the HGDP projects. Data of both studies was downloaded from PLINK 2.0 (https://www.cog-genomics.org/plink/2.0/resources) and merged using PLINK default parameters. The database comprises genotype data of 3,501 unrelated individuals (1,887 males; 1,614 females), from 1KG3 and HGDP projects, belonging to 7 worldwide superpopulations and 72 subpopulations, from a total of 70,139 GWAS Catalog curated unique SNPs (PRSComp_snp_list.txt).

PRScomp参考基因型数据集包含千人基因组第三阶段(1KG3)与人类基因组多样性计划(HGDP)的基因型数据。两项研究的数据均从PLINK 2.0(https://www.cog-genomics.org/plink/2.0/resources)下载,并通过PLINK默认参数完成合并。该数据库涵盖来自1KG3和HGDP项目的3501名无关个体的基因型数据,其中男性1887名、女性1614名,这些个体分属7个全球超级人群与72个亚人群;数据集共包含70139个经全基因组关联分析目录(GWAS Catalog)审核注释的独特单核苷酸多态性位点(Single Nucleotide Polymorphism,SNP),相关SNP列表存储于文件PRSComp_snp_list.txt中。

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2023-10-19
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