Additional file 1 of Depth-related variability in viral communities in highly stratified sulfidic mine tailings
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Additional file 1: Table S1 Biotic and abiotic data for the tailings samples from the Fankou Pb/Zn Mine located in Guangdong Province, P.R. China. Table S2 Detailed information of viral sequences identified in the tailings samples. Table S3 Normalized coverage and taxonomic affiliation of the viral OTUs (vOTUs) identified in the tailings samples. Table S4 16S rRNA gene OTU table and taxonomy of the prokaryotes in the tailings samples. Table S5 Virus-host linkages predicted by prophages and shared genomic matches with host genomes and by protospacer-spacer matches. Table S6 Detailed functional and taxonomic descriptions of viral genes predicted with viral sequences identified in the tailings samples. Indicator COGs in the surface and deeper mine tailings are shown in red and blue, respectively. Table S7 Normalized coverage and functional description of indicator COGs in the surface tailings (red) and deeper layers (blue). Table S8 Detailed information of predicted viral sequences encoding indicator COGs in the surface tailings (red), deeper layers (blue), and both communities (black). Table S9 Detailed functional description and sequence information of the seven viral genomes containing genes involved in assimilatory sulfate reduction (COG0175). Table S10 Homologs of assimilatory sulfate reduction genes (COG0175) and corresponding taxonomy recruited from eggNOG v5.0.0 database.
附加文件1:表S1 中国广东省凡口铅锌矿尾矿样品的生物与非生物数据。表S2 尾矿样品中鉴定出的病毒序列详细信息。表S3 尾矿样品中鉴定出的病毒操作分类单元(viral OTUs,简称vOTUs)的归一化覆盖度与分类学归属。表S4 尾矿样品中原核生物的16S rRNA基因操作分类单元表及其分类学信息。表S5 基于前噬菌体、与宿主基因组的共有基因组匹配以及原间隔区-间隔区匹配预测得到的病毒-宿主关联信息。表S6 基于尾矿样品中鉴定出的病毒序列预测得到的病毒基因的功能与分类学详细描述。地表与深部尾矿中的标志性直系同源基因簇(Clusters of Orthologous Groups, COGs)分别以红色和蓝色标注。表S7 地表(红色)与深部(蓝色)尾矿中标志性COGs的归一化覆盖度及其功能描述。表S8 编码地表(红色)、深部(蓝色)以及两类群落(黑色)标志性COGs的预测病毒序列详细信息。表S9 7个携带参与同化型硫酸盐还原途径基因(COG0175)的病毒基因组的功能描述与序列信息。表S10 从eggNOG v5.0.0数据库中检索得到的同化型硫酸盐还原基因(COG0175)同源物及其对应分类学信息。




