多个数据集
收藏github2017-03-10 更新2024-05-31 收录
下载链接:
https://github.com/sharnam19/awesome-public-datasets
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资源简介:
这是一个包含多个高质量公开数据集的列表,涵盖了农业、生物学等多个领域的数据集。
This is a list of multiple high-quality public datasets, covering multiple fields such as agriculture and biology.
创建时间:
2016-12-18
原始信息汇总
数据集概述
农业
- U.S. Department of Agricultures PLANTS Database
- 链接: http://www.plants.usda.gov/dl_all.html
生物学
- 1000 Genomes
- 链接: http://www.1000genomes.org/data
- American Gut (Microbiome Project)
- 链接: https://github.com/biocore/American-Gut
- Broad Cancer Cell Line Encyclopedia (CCLE)
- 链接: http://www.broadinstitute.org/ccle/home
- Broad Bioimage Benchmark Collection (BBBC)
- 链接: https://www.broadinstitute.org/bbbc
- Cell Image Library
- 链接: http://www.cellimagelibrary.org
- Complete Genomics Public Data
- 链接: http://www.completegenomics.com/public-data/69-genomes/
- EBI ArrayExpress
- 链接: http://www.ebi.ac.uk/arrayexpress/
- EBI Protein Data Bank in Europe
- 链接: http://www.ebi.ac.uk/pdbe/emdb/index.html/
- Electron Microscopy Pilot Image Archive (EMPIAR)
- 链接: http://www.ebi.ac.uk/pdbe/emdb/empiar/
- ENCODE project
- 链接: https://www.encodeproject.org
- Ensembl Genomes
- 链接: http://ensemblgenomes.org/info/genomes
- Gene Expression Omnibus (GEO)
- 链接: http://www.ncbi.nlm.nih.gov/geo/
- Gene Ontology (GO)
- 链接: http://geneontology.org/page/download-annotations
- Global Biotic Interactions (GloBI)
- 链接: https://github.com/jhpoelen/eol-globi-data/wiki#accessing-species-interaction-data
- Harvard Medical School (HMS) LINCS Project
- 链接: http://lincs.hms.harvard.edu
- Human Genome Diversity Project
- 链接: http://www.hagsc.org/hgdp/files.html
- Human Microbiome Project (HMP)
- 链接: http://www.hmpdacc.org/reference_genomes/reference_genomes.php
- ICOS PSP Benchmark
- 链接: http://ico2s.org/datasets/psp_benchmark.html
- International HapMap Project
- 链接: http://hapmap.ncbi.nlm.nih.gov/downloads/index.html.en
- Journal of Cell Biology DataViewer
- 链接: http://jcb-dataviewer.rupress.org
- MIT Cancer Genomics Data
- 链接: http://www.broadinstitute.org/cgi-bin/cancer/datasets.cgi
- NCBI Proteins
- 链接: http://www.ncbi.nlm.nih.gov/guide/proteins/#databases
- NCBI Taxonomy
- 链接: http://www.ncbi.nlm.nih.gov/taxonomy
- NIH Microarray data
- 链接: http://bit.do/VVW6 或 FTP: ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/series/GSE6532/
- OpenSNP genotypes data
- 链接: https://opensnp.org/
- Pathguid - Protein-Protein Interactions Catalog
- 链接: http://www.pathguide.org/
- Protein Data Bank
- 链接: http://www.rcsb.org/
- Psychiatric Genomics Consortium
- 链接: https://www.med.unc.edu/pgc/downloads
- PubChem Project
- 链接: https://pubchem.ncbi.nlm.nih.gov/
- PubGene (now Coremine Medical)
- 链接: http://www.pubgene.org/
- Sanger Catalogue of Somatic Mutations in Cancer (COSMIC)
- 链接: http://cancer.sanger.ac.uk/cosmic
- Sanger Genomics of Drug Sensitivity in Cancer Project (GDSC)
- 链接: http://www.cancerrxgene.org/
- Sequence Read Archive(SRA)
- 链接: http://www.ncbi.nlm.nih.gov/Traces/sra/
- Stanford Microarray Data
- 链接: http://smd.stanford.edu/
- Stowers Institute Original Data Repository
- 链接: http://www.stowers.org/research/publications/odr
- Systems Science of Biological Dynamics (SSBD) Database
- 链接: http://ssbd.qbic.riken.jp
- The Cancer Genome Atlas (TCGA), available via Broad GDAC
- 链接: https://gdac.broadinstitute.org/
- The Catalogue of Life
- 链接: http://www.catalogueoflife.org/content/annual-checklist-archive
- The Personal Genome Project
- 链接: http://www.personalgenomes.org/ 或 PGP: https://my.pgp-hms.org/public_genetic_data
- UCSC Public Data
- 链接: http://hgdownload.soe.ucsc.edu/downloads.html
- Universal Protein Resource (UnitProt)
- 链接: http://www.uniprot.org/downloads
- UniGene
- 链接: http://www.ncbi.nlm.nih.gov/unigene
气候/天气
- Australian Weather
- 链接: http://www.bom.gov.au/climate/dwo/
- Aviation Weather Center - Consistent, timely and accurate weather information for the world airspace system
- 链接: https://aviationweather.gov/adds/dataserver
- Brazilian Weather - Historical data (In Portuguese)
- 链接: http://sinda.crn2.inpe.br/PCD/SITE/novo/site/
- Canadian Meteorological Centre
- 链接: http://weather.gc.ca/grib/index_e.html
- Climate Data from UEA (updated monthly)
- 链接: https://crudata.uea.ac.uk/cru/data/temperature/ 和 ftp://ftp.cmdl.noaa.gov/
- European Climate Assessment & Dataset
- 链接: http://eca.knmi.nl/
- Global Climate Data Since 1929
- 链接: http://en.tutiempo.net/climate
- NASA Global Imagery Browse Services
- 链接: https://wiki.earthdata.nasa.gov/display/GIBS
- NOAA Bering Sea Climate
- 链接: http://www.beringclimate.noaa.gov/
- NOAA Climate Datasets
- 链接: http://www.ncdc.noaa.gov/data-access/quick-links
- NOAA Realtime Weather Models
- 链接: http://www.ncdc.noaa.gov/data-access/model-data/model-datasets/numerical-weather-prediction
- The World Bank Open Data Resources for Climate Change
- 链接: http://data.worldbank.org/developers/climate-data-api
- UEA Climatic Research Unit
- 链接: http://www.cru.uea.ac.uk/data
- WorldClim - Global Climate Data
- 链接: http://www.worldclim.org
- WU Historical Weather Worldwide
- 链接: https://www.wunderground.com/history/index.html
复杂网络
- AMiner Citation Network Dataset
- 链接: http://aminer.org/citation
- CrossRef DOI URLs
- 链接: https://archive.org/details/doi-urls
- DBLP Citation dataset
- 链接: https://kdl.cs.umass.edu/display/public/DBLP
- NBER Patent Citations
- 链接: http://nber.org/patents/
- Network Repository with Interactive Exploratory Analysis Tools
- 链接: http://networkrepository.com/
- NIST complex networks data collection
- 链接: http://math.nist.gov/~RPozo/complex_datasets.html
- Protein-protein interaction network
- 链接: http://vlado.fmf.uni-lj.si/pub/networks/data/bio/Yeast/Yeast.htm
- PyPI and Maven Dependency Network
- 链接: https://ogirardot.wordpress.com/2013/01/31/sharing-pypimaven-dependency-data/
- Scopus Citation Database
- 链接: https://www.elsevier.com/solutions/scopus
- Small Network Data
- 链接: http://www-personal.umich.edu/~mejn/netdata/
- Stanford GraphBase (Steven Skiena)
- 链接: http://www3.cs.stonybrook.edu/~algorith/implement/graphbase/implement.shtml
- Stanford Large Network Dataset Collection
- 链接: http://snap.stanford.edu/data/
- Stanford Longitudinal Network Data Sources
- 链接: http://stanford.edu/group/sonia/dataSources/index.html
- The Koblenz Network Collection
- 链接: http://konect.uni-koblenz.de/
- The Laboratory for Web Algorithmics (UNIMI)
- 链接: http://law.di.unimi.it/datasets.php
- The Nexus Network Repository
- 链接: http://nexus.igraph.org/
- UCI Network Data Repository
- 链接: https://networkdata.ics.uci.edu/resources.php
- UFL sparse matrix collection
- 链接: http://www.cise.ufl.edu/research/sparse/matrices/
- WSU Graph Database
- 链接: http://www.eecs.wsu.edu/mgd/gdb.html
- DIMACS Road Networks Collection
- 链接: http://www.dis.uniroma1.it/challenge9/download.shtml
计算机网络
- 3.5B Web Pages from CommonCraw 2012
- 链接: http://www.bigdatanews.com/profiles/blogs/big-data-set-3-5-billion-web-pages-made-available-for-all-of-us
- 53.5B Web clicks of 100K users in Indiana Univ.
- 链接: http://cnets.indiana.edu/groups/nan/webtraffic/click-dataset/
- CAIDA Internet Datasets
- 链接: http://www.caida.org/data/overview/
- ClueWeb09 - 1B web pages
- 链接: http://lemurproject.org/clueweb09/
- ClueWeb12 - 733M web pages
- 链接: http://lemurproject.org/clueweb12/
- CommonCrawl Web Data over 7 years
- 链接: http://commoncrawl.org/the-data/get-started/
- CRAWDAD Wireless datasets from Dartmouth Univ.
- 链接: https://crawdad.cs.dartmouth.edu/
- Criteo click-through data
- 链接: http://labs.criteo.com/2015/03/criteo-releases-its-new-dataset/
- Open Mobile Data by MobiPerf
- 链接: https://console.developers.google.com/storage/openmobiledata_public/
- Rapid7 Sonar Internet Scans
- 链接: https://sonar.labs.rapid7.com/
- UCSD Network Telescope, IPv4 /8 net
- 链接: http://www.caida.org/projects/network_telescope/
上下文数据
- Context-aware data sets from five domains
- 链接: http://students.depaul.edu/~yzheng8/DataSets.html#Data 或 GitHub: https://github.com/irecsys/CARSKit/tree/master/context-aware_data_sets
数据挑战
- Challenges in Machine Learning
- 链接: http://www.chalearn.org/
- CrowdANALYTIX dataX
- 链接: http://data.crowdanalytix.com/
- D4D Challenge of Orange
- 链接: http://www.d4d.orange.com/en/home
- DrivenData Competitions for Social Good
- 链接: http://www.drivendata.org/
- ICWSM Data Challenge (since 2009)
- 链接: http://icwsm.cs.umbc.edu/
- Kaggle Competition Data
- 链接: https://www.kaggle.com/
- KDD Cup by Tencent 2012
- 链接: http://www.kddcup2012.org/
- Localytics Data Visualization Challenge
- 链接: https://github.com/localytics/data-viz-challenge
- Netflix Prize
- 链接: http://netflixprize.com/leaderboard.html
- Space Apps Challenge
- 链接: https://2015.spaceappschallenge.org/
- Telecom Italia Big Data Challenge
- 链接: https://dandelion.eu/datamine/open-big-data/
- Yelp Dataset Challenge
- 链接: http://www.yelp.com/dataset_challenge
- Bruteforce Database
- 链接: https://github.com/duyetdev/bruteforce-database
地球科学
- AQUASTAT - Global water resources and uses
- 链接: http://www.fao.org/nr/water/aquastat/data/query/index.html?lang=en
- BODC - marine data of ~22K vars
- 链接: http://www.bodc.ac.uk/data/where_to_find_data/
- Earth Models
- 链接: http://www.earthmodels.org/
- EOSDIS - NASAs earth observing system data
- 链接: http://sedac.ciesin.columbia.edu/data/sets/browse
- Integrated Marine Observing System (IMOS) - roughly 30TB of ocean measurements
- 链接: https://imos.aodn.org.au/ 或 S3: http://imos-data.s3-website-ap-southeast-2.amazonaws.com/
- Marinexplore - Open Oceanographic Data
- 链接: http://marinexplore.org/
- Smithsonian Institution Global Volcano and Eruption Database
- 链接: http://volcano.si.edu/
- USGS Earthquake Archives
- 链接: http://earthquake.usgs.gov/earthquakes/search/
经济学
- American Economic Association (AEA)
- 链接: https://www.aeaweb.org/resources/data
- EconData from UMD
- 链接: http://inforumweb.umd.edu/econdata/econdata.html
- Economic Freedom of the World Data
- 链接: http://www.freetheworld.com/datasets_efw.html
- Historical MacroEconomic Statistics
- 链接: http://www.historicalstatistics.org/
- International Economics Database
- 链接: http://widukind.cepremap.org/ 和 various data tools: https://github.com/Widukind
- International Trade Statistics
- 链接: http://www.econostatistics.co.za/
- Internet Product Code Database
- 链接: http://www.upcdatabase.com/
- Joint External Debt Data Hub
- 链接: http://www.jedh.org/
- Jon Haveman International Trade Data Links
- 链接: http://www.macalester.edu/research/economics/PAGE/HAVEMAN/Trade
搜集汇总
数据集介绍

构建方式
该数据集是一个汇总了众多公共数据集的列表,数据集的构建主要通过从博客、回答和用户响应中收集和整理而成。这些数据集大多数是免费的,但也有一部分是收费的。
使用方法
使用该数据集的方法首先是通过其GitHub页面了解各个数据集的详细信息,包括数据集的来源、结构和使用条款。用户可以根据自己的研究需求选择合适的数据集,并通过提供的外部链接进行下载或访问。
背景与挑战
背景概述
该数据集是一个综合性的公共数据集列表,由多个领域的众多数据集组成。这些数据集主要来源于博客、回答和用户响应,其中大部分数据集是免费的,但也有一些不是。该列表的创建旨在为研究者和开发者提供方便,帮助他们在各自的研究和开发工作中找到所需的数据资源。数据集涵盖了农业、生物学、气候/天气、复杂网络、计算机网络、上下文数据、数据挑战、地球科学、经济学、教育、能源、金融、地理信息系统(GIS)、政府、健康护理、图像处理、机器学习、博物馆等多个领域。
当前挑战
该数据集的挑战主要来自于其多样性和广泛性。首先,由于数据集涉及多个领域,研究者需要花费时间筛选和识别与自身研究相关的数据集。其次,数据集的质量和更新频率不一,可能存在一些数据集的准确性和时效性不高的问题。此外,部分数据集可能因为版权或隐私问题无法直接使用,需要研究者进行额外的处理和清洗。最后,由于数据集的来源多样,数据的格式和结构也可能不尽相同,这增加了数据整合和处理的难度。
常用场景
经典使用场景
该数据集广泛用于各领域的数据分析和研究,经典使用场景包括生物信息学、气候研究、复杂网络分析、计算机视觉、经济研究、教育、能源分析、金融分析、地理信息系统、政府数据公开、健康医疗、图像处理、机器学习等。在这些领域中,数据集被用来训练模型、进行趋势分析、预测未来事件、发现数据模式等。
解决学术问题
该数据集解决了多种学术研究问题,如基因序列分析、气候变迁影响评估、社交网络分析、图像识别与分类、金融市场预测、教育资源分配、疾病传播模型构建等。它为研究者提供了丰富的数据资源,帮助他们验证理论、发现新知、推动科学进步。
实际应用
实际应用场景包括疾病监测与预测、智能城市建设、金融市场分析、教育资源优化分配、环境保护与监测、智能交通系统构建等。数据集的应用不仅提高了行业效率,也极大地影响了人们的生活质量。
数据集最近研究
最新研究方向
该数据集涵盖了多个领域的公共数据集,其最新研究方向主要聚焦于数据集的整合、清洗和应用。研究者们正在探索如何高效地利用这些数据集进行深度学习、自然语言处理、计算机视觉等前沿技术的研究,以及如何将这些数据集应用于解决实际问题,如疾病预测、环境监测、金融分析等。
以上内容由遇见数据集搜集并总结生成



