Microclimate and vectorial capacity for dengue transmission in Athens, GA

These data were used to generate the figures for
Wimberly, M. C., J. K. Davis, M. V. Evans, A. Hess, P. M. Newberry, N. Solano-Asamoah, and C. C. Murdock (In Press) Land cover affects microclimate and temperature suitability for arbovirus transmission in an urban landscape, PLoS Neglected Tropical Diseases.
Details of the individual files in the archive are provided below:
tempmaxstack.tif
Predicted maximum daily temperatures in degrees C. The image contains 118 bands, each representing one day from June 15, 2018 through October 10, 2018.
tempminstack.tif
Predicted minimum daily temperatures in degrees C. The image contains 118 bands, each representing one day from June 15, 2018 through October 10, 2018.
vcstack_1.tif, vcstack_2.tif, vcstack_3.tif, vcstack_4.tif
Monthly estimates of mosquito life history traits and vectorial capacity: 1) June-July, 2) July-August, 3) August-September, 4) September-October.Each image has 13 bands:
1: biting rate (a)2: eggs per female per day (EFD)3: egg-to-adult survival (pEA)4: mosquito development rate (MDR)5: longevity (lf)6: transmission probability (b)7: infection probability (c)8: extrinsic incubation period (EIR)9: mortality rate (mu)10: mosquito abundance (mechanistic estimate)11: mosquito abundance (empirical estimate)12: vectorial capacity (based on mechanistic estimate of mosquito abundance)13: vectorial capacity (based on empirical estimate of mosquito abundance)
imperv30.tif
Impervious surface cover estimated using 2018 Sentinel-2 imagery. The image has a single band. Values are in percent cover (0-100).
treecov30.tif
Tree cover estimated using 2018 Sentinel-2 imagery. The image has a single band. Values are in percent cover (0-100).
ndwi.tif
Normalized difference water index estimated using green and near-infrared bands from 2018 Sentinel-2 imagery. The image has a single band. Values are dimensionless indices that can be thresholded to identify water bodies.
micro_2018_daily_data.csv
Daily summaries of 2018 microclimate data recorded using field data loggers. The table contains the following fields:
Date: Date of microclimate recordSite: Side codenum_temp: Number of temperature observationsnum_rh: Number of humidity observationsmean_temp: Mean temperature (degrees C)min_temp: Minimum temperature (degrees C)max_temp: Maximum temperature (degrees C)mean_rh: Mean relative humidity (%)min_rh: Minimum relative humidity (%)max_rh: Maximum relative humidity (%)
logger-site-daily.csv
Daily microclimate summaries from 2016-2017. The table contains the following fields:
day: Date of microclimate recordSite: Site codeTemp_mean: Mean temperature (degrees C)RH_mean: Mean relative humidity (%)Temp_min: Minimum temperature (degrees C)RH_min: Minimum relative humidity (%)Temp_max: Maximum temperature (degrees C)RH_max: Maximum relative humidity (%)
albo-abundance.csv
Mosquito trapping data from 2016-2017. The table contains the following fields:
Site: Site codeDate: Trapping dateSpecies: Mosquito speciesSex: Mosquito sexcount: Number of mosquitoes trappedclass: Type of site (Rural, Suburban, or Urban)week.no: Number of weeks since the start of the field study