Combining StarDist and TrackMate example 1 - Breast cancer cell dataset
收藏资源简介:
<strong>Description</strong>: Contains a StarDist example training dataset, a test dataset, and the StarDist model generated using ZeroCostDL4Mic (see https://github.com/HenriquesLab/ZeroCostDL4Mic/wiki/Stardist) <strong>Training dataset</strong>: 72 Paired microscopy images (fluorescence) and corresponding masks <strong>Microscopy data type</strong>: Fluorescence microscopy (SiR-DNA) and masks obtained via manual segmentation (see https://github.com/HenriquesLab/ZeroCostDL4Mic/wiki/Stardist for details about the segmentation) <strong>Microscope</strong>: Spinning disk confocal microscope with a 20x 0.8 NA objective <strong>Cell type</strong>: DCIS.COM Lifeact-RFP cells <strong>File format</strong>: .tif (16-bit for fluorescence and 8 and 16-bit for the masks) <strong>Image size</strong>: 1024x1024 (Pixel size: 634 nm)
数据集描述:本数据集包含StarDist(StarDist)示例训练数据集、测试数据集,以及通过ZeroCostDL4Mic(ZeroCostDL4Mic)生成的StarDist模型,详情请参见https://github.com/HenriquesLab/ZeroCostDL4Mic/wiki/Stardist。 训练数据集:72张配对的荧光显微镜图像及对应掩码。 显微镜数据类型:SiR-DNA标记的荧光显微镜图像,以及通过手动分割得到的掩码,分割方法详情见https://github.com/HenriquesLab/ZeroCostDL4Mic/wiki/Stardist。 显微镜设备:转盘共聚焦显微镜,搭配20×、0.8数值孔径(NA)物镜。 细胞类型:DCIS.COM Lifeact-RFP细胞。 文件格式:.tif格式,其中荧光图像为16位,掩码支持8位及16位。 图像尺寸:1024×1024(像素尺寸:634 nm)。



