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Additional file 13 of RNA-sequencing based gene expression landscape of guava cv. Allahabad Safeda and comparative analysis to colored cultivars

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Mendeley Data2024-06-25 更新2024-06-27 收录
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Additional file 13. Guava_Reference_Transcriptome_Data files. Data S1. Functional Annotation of Allahabad Safeda Transcriptome Assembly. Data S2. Differential expression among different tissue types, mixed flower buds vs leaf & shoot tip (MFb vs LSt), mixed fruit stages vs leaf & shoot tip (MFr vs LSt) and mixed fruit stages vs mixed flower buds (MFr vs MFb) of Allahabad Safeda. Data S3. Differential expression between mature but unripened fruit (0DF) vs immature fruit (ImF) of Allahabad Safeda. Data S4. Differential expression between 3 days ripe fruit (3DF) vs mature unripened fruit (0DF) of Allahabad Safeda. Data S5. Differential expression between 7 days over-ripe fruit (7DF) vs 3 days ripe fruit (3DF) of Allahabad Safeda. Data S6. Differential expression between red peel vs green peel of Apple Color. Data S7. Differential expression between Punjab Pink mature fruit (PP_0DF) vs Allahabad Safeda mature fruit (AS_0DF). Data S8. FPKM values of DETs among fruit and peel stages of 3 genotypes. Data S9. Expression of genes involved in important pathways for fruit maturation, ripening and pathogenesis in different tissues of 3 guava genotypes.

附加文件13:番石榴参考转录组数据文件。 数据S1:阿拉哈巴德萨夫达(Allahabad Safeda)转录组组装的功能注释。 数据S2:阿拉哈巴德萨夫达不同组织类型的差异表达分析,涵盖混合花芽(mixed flower buds, MFb)与叶和梢尖(leaf and shoot tip, LSt)、混合果实发育期(mixed fruit stages, MFr)与叶和梢尖(LSt),以及混合果实发育期(MFr)与混合花芽(MFb)三组比较。 数据S3:阿拉哈巴德萨夫达成熟未成熟果实(0DF)与未成熟果实(ImF)间的差异表达分析。 数据S4:阿拉哈巴德萨夫达3天成熟果实(3DF)与成熟未成熟果实(0DF)间的差异表达分析。 数据S5:阿拉哈巴德萨夫达7天过熟果实(7DF)与3天成熟果实(3DF)间的差异表达分析。 数据S6:苹果色(Apple Color)材料红果皮与绿果皮间的差异表达分析。 数据S7:旁遮普粉红成熟果实(PP_0DF)与阿拉哈巴德萨夫达成熟果实(AS_0DF)间的差异表达分析。 数据S8:3个基因型果实及果皮阶段的差异表达转录本(Differentially Expressed Transcripts, DETs)的FPKM值。 数据S9:3个番石榴基因型不同组织中,参与果实发育成熟、完熟及致病相关重要通路的基因表达情况。
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2023-06-28
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