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TABLE 1 in Aquatic Biotas of Sundaland Are Fragmented But Not Refugial

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TABLE 1. Summary statistics of genetic diversity for the 9 model species, including the number of individuals (Ind.), number of sampling sites (Sites), maximum standard length (Max. SL), generation time (g), number of MOTUs derived from the majority-rule consensus of the 6 delimitation methods (MOTUs), time (in years) to the most recent common ancestor (TMRCA) of the mitochondrial haplotypes with minimum and maximum age of the 95 % highest posterior densities (HPDs), average nucleotide diversity (π) across the 13 mitochondrial protein-coding genes with minimum and maximum values, average nucleotide diversity (h) across the 13 protein-coding genes with minimum and maximum values, and average Tajima’s D across the 13 protein-coding genes with minimum and maximum values. SpeciesInd.SitesMax. SL size (cm)g (years)MOTUsTMRCA (95% HPDs)Mean π (min – max)Mean h (min – max)Mean Tajima’s D (min – max)Anabas testudineus3314250.61163,245 (97,358 –222,373)0.003 (0.001 –0.007)0.809 (0.222 –1)− 0,724 (− 1.794; 0.156)Barbodes binotatus22963203.363,477,172 (2,785,835 – 4,192,825)0.034 (0.014 – 0.046)0.987 (0.8590– 1)− 1.205 (− 2.516; − 0.564)Channa striata117291008.3133,564 (14,543 – 54,366)0.013 (0.01 –0.018)0.953 (0.860 – 1)− 0.217 (− 2.562; 0.675)Chitala lopis138394.522,135,705 (1,413,433 – 2,618,986)0.032 (0.012 – 0.052)0.965 (0.9– 1)0.088 (− 0.480; 0.496)Hampala macrolepidota218702.43755,054 (307,116 – 1,055,764)0.008 (0.002 –0.013)0.856 (0.250 – 0.964)− 1.046 (− 2.947; 0.215)Monopterus jaoanensis51141008.377,866,547 (5,041,142 –10,616,661)0.067 (0.039 – 0.102)0.958 (0.8– 1)−0.274 (− 2.278; 0.854)Parachela hypophthalmus601816.52.331,750,366 (952,746 – 2,351,482)0.024 (0.011 – 0.041)0.934 (0.810 – 1)0.609 (0.239; 0.936)Trichopodus trichopterus6920151.522,173,705 (1,112,577 – 2,880,424)0.028 (0.011 – 0.040)0.947 (0.644 – 1)0.858 (− 1.747; 1.478)Trigonopoma pauciperforatum1404471.2115,556,063 (4,611,659 –6,619,795)0.066 (0.044 – 0.081)0.996 (0.968 – 1)−0.279 (− 1.539; 0.007)

表1. 9个模式物种的遗传多样性汇总统计量,涵盖个体数(Ind.)、采样位点数量(Sites)、最大标准体长(Max. SL,单位:cm)、世代时间(g,单位:年)、基于6种物种界定方法的多数法则共识得到的分子操作分类单元(MOTUs)数量、线粒体单倍型的最近共同祖先时间(以年为单位,TMRCA,附带95%最高后验密度(HPDs)的最小与最大年龄)、13个线粒体蛋白编码基因的平均核苷酸多样性(π,附带最小与最大取值)、13个蛋白编码基因的平均核苷酸多样性(h,附带最小与最大取值),以及13个蛋白编码基因的平均塔伊马D统计量(Tajima’s D,附带最小与最大取值)。 | 物种 | Ind. | Sites | Max. SL (cm) | g (年) | MOTUs | TMRCA (95% HPDs) | Mean π (min – max) | Mean h (min – max) | Mean Tajima’s D (min – max) | |------|------|-------|-------------|-------|-------|------------------|--------------------|--------------------|------------------------------| | Anabas testudineus | 33 | 14 | 25 | 0.6 | 116 | 3,245 (97,358 – 222,373) | 0.003 (0.001 – 0.007) | 0.809 (0.222 – 1) | −0.724 (−1.794; 0.156) | | Barbodes binotatus | 22 | 96 | 32 | 0.36 | 3,477,172 | (2,785,835 – 4,192,825) | 0.034 (0.014 – 0.046) | 0.987 (0.8590 – 1) | −1.205 (−2.516; −0.564) | | Channa striata | 11 | 72 | 91 | 0.83 | 133,564 | (14,543 – 54,366) | 0.013 (0.01 – 0.018) | 0.953 (0.860 – 1) | −0.217 (−2.562; 0.675) | | Chitala lopis | 13 | 83 | 94.5 | 2 | 2,135,705 | (1,413,433 – 2,618,986) | 0.032 (0.012 – 0.052) | 0.965 (0.9 – 1) | 0.088 (−0.480; 0.496) | | Hampala macrolepidota | 21 | 87 | 02.4 | 37 | 55,054 | (307,116 – 1,055,764) | 0.008 (0.002 – 0.013) | 0.856 (0.250 – 0.964) | −1.046 (−2.947; 0.215) | | Monopterus jaoanensis | 51 | 14 | 100 | 8.3 | 7,866,547 | (5,041,142 – 10,616,661) | 0.067 (0.039 – 0.102) | 0.958 (0.8 – 1) | −0.274 (−2.278; 0.854) | | Parachela hypophthalmus | 60 | 18 | 16.5 | 2.3 | 31,750,366 | (952,746 – 2,351,482) | 0.024 (0.011 – 0.041) | 0.934 (0.810 – 1) | 0.609 (0.239; 0.936) | | Trichopodus trichopterus | 69 | 20 | 15 | 1.5 | 22,173,705 | (1,112,577 – 2,880,424) | 0.028 (0.011 – 0.040) | 0.947 (0.644 – 1) | 0.858 (−1.747; 1.478) | | Trigonopoma pauciperforatum | 14 | 04 | 47 | 1.2 | 115,556,063 | (4,611,659 – 6,619,795) | 0.066 (0.044 – 0.081) | 0.996 (0.968 – 1) | −0.279 (−1.539; 0.007) |

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