Additional file 11 of Dynamic genome-wide association analysis and identification of candidate genes involved in anaerobic germination tolerance in rice

Additional file 11: Table S9. The significant SNPs for coleoptiles length (CL) and diameter (CD) under anaerobic germination (AG) using genome-wide association. Note: a The SNP positions were based on the annotation data on Os-Nipponbare-Reference-IRGSP-1.0 (RAP-DB, http://rapdb.dna.affrc.go.jp/ ); b Position of the SNP showing the most significant association for AG附加文件11：表S9。本研究通过全基因组关联分析，鉴定出无氧萌发（anaerobic germination, AG）条件下与胚芽鞘长度（coleoptiles length, CL）及胚芽鞘直径（coleoptiles diameter, CD）显著关联的单核苷酸多态性位点（Single Nucleotide Polymorphisms, SNPs）。注：a 该批SNP位点的定位基于日本晴参考基因组Os-Nipponbare-Reference-IRGSP-1.0的注释数据（RAP-DB数据库，http://rapdb.dna.affrc.go.jp/）；b 与无氧萌发（AG）关联最为显著的SNP位点的位置。