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High occurrence of jellyfish predation by black-browed and Campbell albatross identified by DNA metabarcoding

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Research Data Australia2024-12-14 收录
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https://researchdata.edu.au/high-occurrence-jellyfish-dna-metabarcoding/945469
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This spreadsheet provides the sequences counts for the DNA groups found in the scats of black-browed albatross at New Island and Steeple Jason Island, Falkland Islands; Diego Ramírez and Albatross Islet, Chile; Bird Island, South Georgia; Canyon des Sourcils Noirs, Kerguelen Archipelago, France; Macquarie Island, Australia; and Campbell albatross at Campbell Island, NZ.Scat samples were collected in 2013/14 and 2014/15 at New Island, Steeple Jason Island, Macquarie Island, Campbell Island and Bird Island; in 2013/14 and 2015/16 at Kerguelen; in 2014/15 and 2015/16 at Albatross Islet and in 2013/14 at Diego Ramírez. Samples were collected during Incubation (Oct-Nov), early chick-rearing (Dec-Jan) or late-chick rearing (Feb-Mar). Due to the availability of birds at the colony, samples were predominantly collected from adults during incubation and early chick-rearing and chicks during late chick rearing. Samples sizes were too low during this study to directly compare dietary differences between chicks and adults; however, dietary comparisons between breeding stages were examined for sites where samples were collected during multiple breeding stages.Samples were PCR amplified with a universal metazoan primer set that is highly conserved and amplifies a region of the nuclear small subunit ribosomal DNA gene (18S rDNA). Details of the molecular methods and synthesis of this data can be found in: McInnes, J.C., Alderman, R., Raymond, B., Lea, M-A., Deagle, B., Catry, P., Gras, M., Phillip, R.A., Stanworth, A., Suazo, C., Thompson, D., Weimerskirch, H., Gras. M., and Jarman, S.N. High occurrence of jellyfish predation by black-browed and Campbell albatross identified by DNA metabarcoding. Molecular Ecology.

本电子表格提供了在福克兰群岛新岛与陡杰森岛、智利迭戈拉米雷斯岛与信天翁岛、南乔治亚伯德岛、法属凯尔盖朗群岛黑泉峡谷(Canyon des Sourcils Noirs)、澳大利亚麦夸里岛采集的黑眉信天翁,以及新西兰坎贝尔岛采集的坎贝尔信天翁粪样中检出的DNA类群序列计数数据。 粪样采集信息如下:2013/14年度与2014/15年度于新岛、陡杰森岛、麦夸里岛、坎贝尔岛及伯德岛;2013/14年度与2015/16年度于凯尔盖朗群岛;2014/15年度与2015/16年度于信天翁岛;2013/14年度于迭戈拉米雷斯岛。 样本采集时段涵盖繁殖期(10-11月)、雏鸟早期抚育期(12-1月)与雏鸟晚期抚育期(2-3月)。受繁殖群中鸟类可及性限制,样本主要采集自繁殖期与雏鸟早期抚育期的成鸟,以及雏鸟晚期抚育期的雏鸟。 本研究样本量有限,无法直接比较雏鸟与成鸟的饮食差异;但针对多个繁殖阶段均采集到样本的研究位点,可开展不同繁殖阶段间的饮食对比分析。 所有样本均采用保守性极强的通用后生动物引物组进行PCR扩增,可靶向扩增核小亚基核糖体DNA(18S rDNA)的特定区域。 本研究的分子实验方法与数据整合细节可参阅以下文献:McInnes JC, Alderman R, Raymond B, Lea M-A, Deagle B, Catry P, Gras M, Phillip RA, Stanworth A, Suazo C, Thompson D, Weimerskirch H, Gras M, Jarman SN. 基于DNA宏条形码(DNA metabarcoding)技术鉴定黑眉信天翁与坎贝尔信天翁捕食水母的高发生率. 《分子生态学》(Molecular Ecology).
提供机构:
Australian Antarctic Division
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