Corallium rubrum genome and transcripts alignment

Corallium rubrum, the precious red coral, is an octocoral endemic to the western Mediterranean Sea. It plays a key role in the well-known Mediterranean coralligenous ecosystem, a biodiversity hotspot. We sequenced its genome for further investigations into its biology (skeleton formation and color, genetic diversity), ecology, and evolutionary history., The genome sequence of Corallium rubrum assembled at the CSM was aligned using STAR with its transcriptome assembled using trinity. RNA and genomic DNA were extracted from the same organism., , # Corallium rubrum Genome and transcripts alignment

[https://doi.org/10.5061/dryad.ksn02v7d6](https://doi.org/10.5061/dryad.ksn02v7d6)

The genome sequence of *Corallium rubrum* assembled at the CSM was aligned using STAR with its transcriptome assembled using trinity. RNA and genomic DNA were extracted from the same organism.

## Description of the data and file structure

The file corresponds to the BAM file alignment and the indexed BAI file

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## Code/Software

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红珊瑚（Corallium rubrum）是一种特有分布于西地中海的八放珊瑚（octocoral）。它在广为人知的地中海珊瑚岩（coralligenous）生态系统——这一全球生物多样性热点区域——中发挥着关键作用。为深入研究其生物学特性（骨骼形成与体色形成、遗传多样性）、生态学特征及演化历史，我们对其基因组进行了测序。由CSM组装的红珊瑚基因组序列，通过STAR比对工具与使用Trinity组装的转录组完成了序列比对。实验所用RNA与基因组DNA均提取自同一生物体。

# 红珊瑚基因组与转录本比对

https://doi.org/10.5061/dryad.ksn02v7d6

由CSM组装的红珊瑚基因组序列，通过STAR比对工具与使用Trinity组装的转录组完成了序列比对。实验所用RNA与基因组DNA均提取自同一生物体。

## 数据与文件结构说明
本文件包含经序列比对得到的BAM文件及已建立索引的BAI索引文件

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## 代码与软件
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