Spearman rank correlation analysis for pairs of E-cadherin turnover rates.
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E-cadherin turnover rates were measured by FRAP as follows: iterative pairs were obtained by measuring E-cadherin turnover rates in a same spot at two time points 45 minutes apart (line 1). Single-cell pairs were obtained by measuring rates simultaneously at two distinct junctions of a same cell (line 2). Single-junction pairs were assessed by dual-color FRAP on E-cadherin from two neighbor cells in a same junction (line 3). Correlations within pairs (between koff#2 and koff#1) were estimated by computing the Spearman coefficient symsymρ. As a comparison to evaluate the strength of the correlation, this result is compared to a randomized situation, obtained by a random permutation within one set of rates (koff#2). Significant correlations (pSpearman rank correlation analysis for pairs of E-cadherin turnover rates.
研究人员采用荧光漂白恢复实验(FRAP)测定E-钙粘蛋白(E-cadherin)的周转速率,实验分组方式如下: 1. 迭代配对样本:在同一观测点以45分钟为间隔开展两次测量,以此获取该观测点的E-钙粘蛋白周转速率配对数据; 2. 单细胞配对样本:对同一细胞的两个不同细胞连接同时测定周转速率,以此获取配对数据; 3. 单连接配对样本:针对同一细胞连接内的两个相邻细胞的E-钙粘蛋白,采用双色荧光漂白恢复实验(FRAP)进行检测,以此获取配对数据。 配对样本内的相关性(即koff#2与koff#1之间的相关性)通过计算斯皮尔曼相关系数symsymρ进行评估。为评估相关性的强弱,将上述计算得到的相关系数与随机化场景下的结果进行对比:随机化场景通过对单一组别周转速率(koff#2)进行随机置换得到。随后通过斯皮尔曼等级相关分析,对E-钙粘蛋白周转速率配对样本的相关性显著性进行检验。



