遇见数据集

Genetic and epigenetic regulation of zebrafish intestinal development

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Zenodo2020-09-20 更新2026-05-25 收录
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This dataset contains zebrafish (<em>Danio rerio</em>) raw RNA and ChIP (paired-end) sequencing data: RNA-seq lane1_BSwt5dpf*: 3 biological replicates of RNA-seq data from 5dpf wild-type (AB background) pooled intestines lane1_BSwt7dpf*: 3 biological replicates of RNA-seq data from 7dpf wild-type (AB background) pooled intestines lane1_BSwt9dpf*: 3 biological replicates of RNA-seq data from 9dpf wild-type (AB background) pooled intestines ChIP-seq Cldn-wt-int-5dpf-H3K27me3*: 2 biological replicates of H3K27me3 ChIP-seq data from 5dpf wild-type (AB background) pooled intestines Cldn-wt-int-5dpf-H3K4me3*: 2 biological replicates of H3K4me3 ChIP-seq data from 5dpf wild-type (AB background) pooled intestines Cldn-wt-int-5dpf-input-12727_R[12].fastq.gz: 1 sample of input ChIP-seq data from 5dpf wild-type (AB background) pooled intestines Cldn-wt-int-7dpf-H3K27me3*: 2 biological replicates of H3K27me3 ChIP-seq data from 7dpf wild-type (AB background) pooled intestines Cldn-wt-int-7dpf-H3K4me3*: 2 biological replicates of H3K4me3 ChIP-seq data from 7dpf wild-type (AB background) pooled intestines Cldn-wt-int-7dpf-input-12727_R[12].fastq.gz: 1 sample of input ChIP-seq data from 7dpf wild-type (AB background) pooled intestines Cldn-wt-int-9dpf-H3K27me3*: 2 biological replicates of H3K27me3 ChIP-seq data from 9dpf wild-type (AB background) pooled intestines Cldn-wt-int-9dpf-H3K4me3*: 2 biological replicates of H3K4me3 ChIP-seq data from 9dpf wild-type (AB background) pooled intestines Cldn-wt-int-9dpf-input-12727_R[12].fastq.gz: 1 sample of input ChIP-seq data from 9dpf wild-type (AB background) pooled intestines

本数据集涵盖斑马鱼(*Danio rerio*)的原始RNA测序与染色质免疫沉淀(ChIP)双端测序数据: RNA测序(RNA-seq) lane1_BSwt5dpf*:来自5日龄野生型(AB背景)斑马鱼混合肠道的RNA-seq数据,包含3个生物学重复样本 lane1_BSwt7dpf*:来自7日龄野生型(AB背景)斑马鱼混合肠道的RNA-seq数据,包含3个生物学重复样本 lane1_BSwt9dpf*:来自9日龄野生型(AB背景)斑马鱼混合肠道的RNA-seq数据,包含3个生物学重复样本 ChIP测序(ChIP-seq) Cldn-wt-int-5dpf-H3K27me3*:来自5日龄野生型(AB背景)斑马鱼混合肠道的H3K27me3 ChIP-seq数据,包含2个生物学重复样本 Cldn-wt-int-5dpf-H3K4me3*:来自5日龄野生型(AB背景)斑马鱼混合肠道的H3K4me3 ChIP-seq数据,包含2个生物学重复样本 Cldn-wt-int-5dpf-input-12727_R[12].fastq.gz:来自5日龄野生型(AB背景)斑马鱼混合肠道的ChIP测序输入对照样本,共1份 Cldn-wt-int-7dpf-H3K27me3*:来自7日龄野生型(AB背景)斑马鱼混合肠道的H3K27me3 ChIP-seq数据,包含2个生物学重复样本 Cldn-wt-int-7dpf-H3K4me3*:来自7日龄野生型(AB背景)斑马鱼混合肠道的H3K4me3 ChIP-seq数据,包含2个生物学重复样本 Cldn-wt-int-7dpf-input-12727_R[12].fastq.gz:来自7日龄野生型(AB背景)斑马鱼混合肠道的ChIP测序输入对照样本,共1份 Cldn-wt-int-9dpf-H3K27me3*:来自9日龄野生型(AB背景)斑马鱼混合肠道的H3K27me3 ChIP-seq数据,包含2个生物学重复样本 Cldn-wt-int-9dpf-H3K4me3*:来自9日龄野生型(AB背景)斑马鱼混合肠道的H3K4me3 ChIP-seq数据,包含2个生物学重复样本 Cldn-wt-int-9dpf-input-12727_R[12].fastq.gz:来自9日龄野生型(AB背景)斑马鱼混合肠道的ChIP测序输入对照样本,共1份

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Zenodo
创建时间:
2018-11-27
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