smmip_tools_CL - samples

NIAID Data Ecosystem2026-03-12 收录

SmMIP靶向测序文库构建

家系基因组分析

数据链接：

https://www.omicsdi.org/dataset/ega/EGAD00001007790 数据链接链接失效反馈

官方服务：

资源简介：

SmMIP libraries using bulk cell line DNA and DNA mixes were generated in replicates and were sequenced on the NovaSeq SP platform (Illumina)EGA dataset EGAD00001007790

创建时间：

2021-08-18

1 - Agrogenom homologous gene family alignments

家系基因组分析

密码子序列比对

6662 gene families nucleic sequence aligned at the codon level. Used MUSCLE on corresponding protein alignments and then pal2nal to reverse-translate in CDS alignments.

Figshare2017-04-25 更新60

Expression counts of all genes including both NB and AB groups.

黑色素瘤基因表达与功能

家系基因组分析

Expression counts of all genes of cell lines from NB and AD melanocytes using four different methods (the K4D, K4DT, SV40T, and E6/E7 methods).

Figshare2023-07-16 更新20

Figures on Identification of CNL Disease Resistance Genes in Aegilops tauschii coss. (Poaceae) to accompany Andersen et al (2015) published in the Proceeding of South Dakota Academy of Sciences. 94:281-295.

植物抗病基因

家系基因组分析

Figure 1. Phylogenetic analysis of the CNL genes of Aegilops tauschii and their orthologs in Arabidopsis thaliana . The tree was constructed using the JTT+G model with 100 boots

Figshare2019-02-26 更新20

DataSheet_2_Multi-Omics Analysis of the Expression and Prognosis for FKBP Gene Family in Renal Cancer.xlsx

癌预后标志物

家系基因组分析

BackgroundThe FK506-binding protein (FKBP) is a family of intracellular receptors that can bind specifically to the immunosuppressant FK506 and rapamycin. Although FKBPs play crucial roles in biologic

NIAID Data Ecosystem50

Genome sequencing of ayes-ayes (Daubentonia madagascarensis)

狐猴全基因组测序

家系基因组分析

BCM HGSC generated approximately 40X whole genome sequencing of 18 ayes-ayes (Daubentonia madagascarensis) from multiple pedigrees including 12 independent trios.

NIAID Data Ecosystem20

smmip_tools_CL - samples

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