MOESM5 of The Pseudomonas aeruginosa accessory genome elements influence virulence towards Caenorhabditis elegans

Additional file 5: Table S4. Nomenclature for the experimentally studied bacterial genes. A set of genes associated with virulence are termed for the P. aeruginosa strains z8 and PAO1. Genes that constitute a gene block frequently found in multiple tandem copies in various strains are termed teg(G to N), for 'tandem element gene'. The region encompassing from tegG to tegN is referred to as 'teg gene block’. The Refseq gene ‘NT41_RS12090’ is termed ghlO (glycosyl hydrolase like ORF) as it exhibits similarity to domain Cdd:cd06549 (E-value: 0.02, CDD database) . The PAO1 genes: PA2228, vqsM, qsrO, and PA225, constitute a putative operon [33] that is referred to as ‘qsr’ operon.补充材料5：表S4。实验研究的细菌基因命名规则。针对铜绿假单胞菌（P. aeruginosa）菌株z8与PAO1的一组毒力相关基因已完成命名。构成一类在多种菌株中频繁以多串联拷贝形式存在的基因块（gene block）的相关基因被命名为teg(G至N)，即“串联元件基因（tandem element gene）”。涵盖tegG至tegN的区域被称为“teg基因块（teg gene block）”。参考序列数据库（RefSeq）中的基因“NT41_RS12090”被命名为ghlO（糖基水解酶样开放阅读框，glycosyl hydrolase like ORF），因其与保守结构域数据库（CDD database）中的结构域Cdd:cd06549具有序列相似性（E值：0.02）。PAO1菌株的PA2228、vqsM、qsrO与PA225基因构成一个推定操纵子（operon）[33]，该操纵子被命名为“qsr操纵子”。