Within-patient evolution of invasive Campylobacter jejuni reveals genetic drivers of antibiotic resistance and adaptation to human blood (genome assembly and annotation dataset)

This dataset includes the assembled contig (.fasta and .gbk files), the nucleotide sequences of the predicted genes, and the corresponding amino acid sequences of the stool isolate (Cj_PT_2015_CHUC_stool_1). This isolate was used as the reference for identifying inter- and intra-isolate SNPs and indels acquired throughout the microevolution of the invasive C. jejuni strain during infection. All raw sequence reads used in this study were deposited in the European Nucleotide Archive (ENA) (BioProject XXXXX). The associated article can be found here: TO BE ADDED本数据集包含组装重叠群（assembled contig）的.fasta与.gbk格式文件、预测基因的核苷酸序列，以及粪便分离株Cj_PT_2015_CHUC_stool_1对应的氨基酸序列。该分离株被用作参照，用于鉴定感染过程中侵袭性空肠弯曲杆菌（C. jejuni）菌株微进化阶段所获得的分离株间及分离株内单核苷酸多态性（SNPs）与插入缺失变异（indels）。 本研究使用的全部原始测序读段已提交至欧洲核苷酸档案库（European Nucleotide Archive, ENA），对应生物项目编号为XXXXX。 相关文章链接待补充。