Processed exon counts from Lyme disease study (GEO accession number GSE63085)

We illustrate the use of different implementations of the hierarchical NB model by using a dataset obtained from an RNA-seq experiment Bouquet et al. [2016]. The raw data are publicly available under GEO accession number GSE63085. This is a processed dataset which contains 137,078 exons with a nonzero sum of counts across all samples, grouped into 18,765 protein-coding genes, were included in the analysis.