Data S2. Oultier Loci
收藏DataONE2015-01-08 更新2024-06-27 收录
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Multi-locus SNP data for all individuals of known ecotype and all trawl samples at the 18 outlier loci identified in this study. Data are presented in two-row Structure format; the first column contains sample names, the second column contains a number indicating the treatment (1=stream, 2=shore, 3=trawl), the remaining columns contain genotypes with “-9” used to indicate missing data.
Sample names use the following convention:
-The first two characters indicate either the Stream (St) or Shore (Sh) ecotype.
-The second two characters indicate the sample location: Mission Creek (MK), Peachland Creek (PA), Powers Creek (PW), Penticton Creek (PN), Northeast shore (NE), Northwest shore (NW), Southeast shore (SE).
-The four characters following the underscore indicate the year that samples were collected (either 2007 or 2010).
-The final characters following the hyphen indicate the unique sample ID number for the ecotype, location, and year.
-'Tr' is used to indicate samples of unknown ecotype that were collected by trawl.
本研究鉴定得到18个异常位点(outlier loci)的多位点单核苷酸多态性(Single Nucleotide Polymorphism, SNP)数据集,涵盖所有已知生态型个体与所有拖网采样样本。数据采用双行Structure格式存储:第一列为样本名称,第二列为代表采样分组的数字(1=溪流生态型,2=岸栖生态型,3=拖网样本),其余列为基因型数据,其中“-9”用于标记缺失基因型。
样本名称遵循如下命名规则:
- 前两位字符代表生态型:St对应溪流(Stream)生态型,Sh对应岸栖(Shore)生态型;
- 后续两位字符代表采样地点:Mission Creek(MK)、Peachland Creek(PA)、Powers Creek(PW)、Penticton Creek(PN)、东北岸(NE)、西北岸(NW)、东南岸(SE);
- 下划线后的四位字符为样本采集年份(仅为2007或2010年);
- 连字符后的末尾字符为该生态型、采样地点及采集年份下的唯一样本编号;
- 前缀“Tr”用于标记通过拖网采集的未知生态型样本。
创建时间:
2015-01-08



