A multi FASTA alignment of Salmonella Typhi genomes, mapped to CT18 from the Nature genetics paper - Phylogeographical analysis of the dominant multidrug-resistant H58 clade of Salmonella Typhi identifies inter- and intracontinental transmission events

A multi FASTA alignment of Salmonella Typhi genomes, mapped to CT18 ( AL513382) with repeat regions and mobile elements filtered out. It is an intermediate result from the Nature Genetics paper "Phylogeographical analysis of the dominant multidrug-resistant H58 clade of Salmonella Typhi identifies inter- and intracontinental transmission events" by Vanessa Wong. This dataset is used as part of another paper on the SNP-sites software.

本数据集为伤寒沙门氏菌（Salmonella Typhi）基因组的多重FASTA比对（multi FASTA alignment）结果，已比对至参考基因组CT18（登录号AL513382），且已过滤掉重复区域（repeat regions）与可移动遗传元件（mobile elements）。该数据集为凡妮莎·王（Vanessa Wong）发表于《自然·遗传学》（Nature Genetics）的论文《伤寒沙门氏菌主要多重耐药H58进化支的系统地理学分析揭示洲际及洲内传播事件（Phylogeographical analysis of the dominant multidrug-resistant H58 clade of Salmonella Typhi identifies inter- and intracontinental transmission events）》的中间分析结果，目前已被用作另一项基于SNP-sites软件（SNP-sites）的研究的组成部分。