Additional file 2: Table S1. of A-to-I RNA editing in the rat brain is age-dependent, region-specific and sensitive to environmental stress across generations
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RNA editing sites detected with mmPCR-seq. Table S2. Primer sequences used for mmPCR-seq, Real-Time PCR and Htr2c-directed NGS. Table S3. % RNA editing in PFC and AMY of neonatal (P0) vs. adult (P60) rats. Table S4. Age-dependent changes in Htr2c isoform prevalence in PFC and AMY. Table S5. % RNA editing in neonatal (P0) and adult (P60) PFC vs. AMY. Table S6. Htr2c and ADARs correlations with significant non-synonymous editing sites. Table S7. Changes in Htr2c isoform prevalence in PFC vs. AMY at P0 and P60. Table S8. The effects of PRS on RNA editing at learning- and stress-related genes in F0, F1 and F2. Table S9. Statistical analysis of editing differences between oocytes, PFC and AMY. (XLSX 92 kb)
经mmPCR-seq技术检测获得的RNA编辑位点。表S2:用于mmPCR-seq、实时荧光定量PCR(Real-Time PCR)及靶向Htr2c的下一代测序(NGS)的引物序列。表S3:新生(P0)与成年(P60)大鼠前额叶皮层(Prefrontal Cortex, PFC)及杏仁核(Amygdala, AMY)的RNA编辑百分比。表S4:前额叶皮层与杏仁核中Htr2c亚型占比随年龄的变化情况。表S5:新生(P0)与成年(P60)大鼠前额叶皮层相较于杏仁核的RNA编辑百分比。表S6:针对显著性非同义编辑位点的Htr2c与RNA编辑腺苷脱氨酶(ADARs)的相关性分析。表S7:P0及P60龄时,前额叶皮层相较于杏仁核的Htr2c亚型占比变化。表S8:F0、F1及F2代中,多基因风险评分(Polygenic Risk Score, PRS)对学习相关与应激相关基因RNA编辑的影响。表S9:卵母细胞、前额叶皮层与杏仁核之间编辑差异的统计学分析。(XLSX格式,文件大小92 KB)
创建时间:
2023-06-28



