Supplementary Files for "A draft genome of the neritid snail Theodoxus fluviatilis"

The file GenomeImprovementPipeline.sh describes the code that was used in creating the genome assembly and annotation for Theodoxus fluviatilis.The file TableS1.csv contains information about the 50 Illumina whole genome sequences that were generated and are deposited at NCBI.The file TableS2.csv contains information for different assemblers that were tried on the PacBio WGS data.The file FigureS1.pdf contains the results of the contamination screening of the initial genome assembly, using BlobTools blobtoolkit.The file FigureS2.pdf contains the results of the contamination screening of the final genome assembly, using BlobTools blobtoolkit.

脚本文件GenomeImprovementPipeline.sh记录了用于构建河狭口螺（Theodoxus fluviatilis）基因组组装与注释的代码。附表1（TableS1.csv）包含了50套已生成并提交至NCBI数据库的Illumina全基因组测序序列的相关信息。附表2（TableS2.csv）收录了针对PacBio全基因组测序（Whole Genome Sequencing, WGS）数据所尝试使用的各类基因组组装软件的相关信息。附图1（FigureS1.pdf）展示了初始基因组组装的污染筛查结果，分析采用了BlobTools工具包（BlobTools blobtoolkit）。附图2（FigureS2.pdf）展示了最终基因组组装的污染筛查结果，同样使用BlobTools工具包完成分析。