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ML estimates of the present models with the respective selective constraints for the 1-PAM amino acid substitution matrices of cpREV and mtREV.

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Figshare2015-12-02 更新2026-04-29 收录
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aIn all models, equal codon usage () is assumed. If the value of a parameter is parenthesized, the parameter is not variable but fixed to the value specified.b for cpREV, and for mtREV; see text for details.c #parameters with for cpREV, and for mtREV; see text for details.dNote that these ratios are not the ratios of the rates per site but per codon; see text for details.

a. 所有模型均假定密码子使用频率均等(原文此处未补充额外说明)。若参数值带有括号,则该参数并非可变参数,而是被固定为括号内指定的取值。b. 叶绿体替换模型(cpREV)与线粒体替换模型(mtREV)的相关细节详见正文。c. 叶绿体替换模型(cpREV)与线粒体替换模型(mtREV)的参数数量相关细节详见正文。d. 请注意,此处的比值并非各位点的替换率比值,而是各密码子的替换率比值,相关细节详见正文。

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2015-12-02
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