Additional file 2: of Whole genome and transcriptome analysis reveal adaptive strategies and pathogenesis of Calonectria pseudoreteaudii to Eucalyptus

Figure S1. Evolutionary genealogy of genes: Non-supervised Orthologous Groups (eggNOG) function annotation of the C. pseudoreteaudii genome. In total, there are 11,760 genes (81.92%) that have functional assignments. Figure S2. Gene ontology (GO) functional classification of the C. pseudoreteaudii genome. In total, there are 8972 genes (62.5%) that have functional assignments. Figure S3. Overrepresented GO categories of gene specific in C. pseudoreteaudii. Figure S4. GO term enrichment analysis of the expanded gene families in C. pseudoreteaudii. Figure S5. GO functional annotation of differentially expressed genes of C. pseudoreteaudii in Eucalyptus tissue medium culture (log2 fold-changes). a. Up-regulated genes. b. Down-regulated genes.The X- axis represents the number of genes in a functional group. (ZIP 12374 kb)