Additional file 2: of TrawlerWeb: an online de novo motif discovery tool for next-generation sequencing datasets

Table S2. Details of motif occurrence comparison between web-based motif discovery software. The highest scoring motifs discovered in DREME, MEME, RSAT peak-motifs, and TrawlerWeb and their corresponding occurrences are illustrated here. For the highest scoring motif, the number of motif occurrences were expressed as a percentage of the total number of input sequences. *MEME-ChIP pre-processes submitted sequences longer than 100 by trimming them evenly from both ends to get the centered 100Â bp sequence and discards trimmed sequences containing only Ns from repeat masking. **MEME motif discovery automatically limits the run to a randomly sampled 600 sequences to reduce run time. (XLSX 576Â kb)

表S2 基于网页的基序发现软件的基序出现比对详情。本表格展示了在DREME、MEME、RSAT peak-motifs及TrawlerWeb中鉴定得到的得分最高的基序及其对应的出现频次。针对得分最高的基序，其出现频次以输入序列总数量的百分比形式呈现。*MEME-ChIP会对长度超过100 bp的提交序列执行预处理：从两端均匀截短以得到居中的100 bp序列，并在重复序列屏蔽流程中丢弃仅含N碱基的截短序列。**MEME基序发现工具会自动将运行范围限定为随机抽样的600条序列，以缩短运行耗时。（XLSX格式，576 KB）