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Additional file 1: of Comparing mutation calls in fixed tumour samples between the affymetrix OncoScanÂŽ array and PCR based next-generation sequencing

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DataCite Commons2024-12-18 更新2024-07-25 收录
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https://springernature.figshare.com/articles/dataset/Additional_file_1_of_Comparing_mutation_calls_in_fixed_tumour_samples_between_the_affymetrix_OncoScan_array_and_PCR_based_next-generation_sequencing/4765168
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This details all OncoScan and NGS calls for all samples. For each call, recorded are sample name, MAPD, ndSNPQC, which primer pair was used for the NGS comparison, the SM name,OncoScan call for that SM (true or false), the SM score, the NGS call, total NGS reads, NGS variant allele frequency, comparison type (concordant positive/negative, discrepant positive/negative, exclude) and any comments about reasons for exclusion). (XLSX 185 kb)

本数据集详述了所有样本的OncoScan与下一代测序(Next-Generation Sequencing,NGS)检测判定结果。针对每一项检测判定,所记录的信息包括:样本名称、MAPD、ndSNPQC、用于NGS比对的引物对、SM名称、对应SM的OncoScan判定结果(真/假)、SM得分、NGS判定结果、NGS总读取数、NGS变异等位基因频率、比对类型(一致阳性/阴性、不一致阳性/阴性、需排除)以及任何关于排除原因的注释。(XLSX格式,文件大小185 KB)
提供机构:
Figshare
创建时间:
2017-03-19
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