Additional file 3 of Clonal evolution in liver cancer at single-cell and single-variant resolution

Additional file 3: Table S1. Exonic mutations in single-cell WGA mixtures from HCC. This table shows all the exonic mutations derived from WES of single-cell WGA mixtures from HCC1-T, HCC2-T, HCC5-T, HCC9-T, HCC8-T and HCC8-PVTT. Mutations were called with GATK, and annotated with ANNOVAR and Oncotator. SNPs were filtered using dbSNP141 and 1,000 Genomes Project (v3) database. The synonymous mutations were further filtered. This table is related to Fig S2.附加文件3：表S1。肝细胞癌（Hepatocellular Carcinoma, HCC）单细胞全基因组扩增（Whole Genome Amplification, WGA）混合样本的外显子突变信息。本表格收录了来自HCC1-T、HCC2-T、HCC5-T、HCC9-T、HCC8-T及HCC8-PVTT的单细胞WGA混合样本经全外显子测序（Whole Exome Sequencing, WES）得到的全部外显子突变位点。突变位点通过GATK（Genome Analysis Toolkit，基因组分析工具包）进行检出，并由ANNOVAR与Oncotator完成功能注释。单核苷酸多态性（Single Nucleotide Polymorphism, SNP）通过dbSNP141及千人基因组计划（v3）数据库进行过滤，并进一步剔除了同义突变。本表格与补充图S2相关联。