Gene trees

*Color coding used in gene trees: Physalacriaceae (green), other Basidiomycota (blue), Ascomycota (red), early diverging fungi (black) *Horizontal transfer events are highlighted by yellow clades This folder contains additional supplementary files (gene trees showing clades with horizontal gene transfer events - Table S4) used in the manuscript: Genomic innovation and horizontal gene transfer shaped plant colonization and biomass degradation strategies of a globally prevalent fungal pathogen Neha Sahu, Boris Indic, Johanna Wong-Bajracharya, Zsolt Merényi, Huei-Mien Ke, Steven Ahrendt, Tori-Lee Monk, Sándor Kocsubé, Elodie Drula, Anna Lipzen, Balázs Bálint, Bernard Henrissat, Bill Andreopoulos, Francis M. Martin, Christoffer Bugge Harder, Daniel Rigling, Kathryn L. Ford, Gary D. Foster, Jasmyn Pangilinan, Alexie Papanicolaou, Kerrie Barry, Kurt LaButti, Máté Virágh, Maxim Koriabine, Mi Yan, Robert Riley, Simang Champramary, Krista L. Plett, Igor V. Grigoriev, Isheng Jason Tsai, Jason Slot, György Sipos, Jonathan Plett, László G. Nagy bioRxiv 2022.11.10.515791; doi: https://doi.org/10.1101/2022.11.10.515791

基因树所用颜色编码规则如下：球盖菇科（Physalacriaceae）以绿色标注，其他担子菌门（Basidiomycota）以蓝色标注，子囊菌门（Ascomycota）以红色标注，早期分化真菌以黑色标注。水平基因转移事件以黄色演化支（clade）高亮展示。本文件夹包含本研究手稿中所用的补充文件，即展示带有水平基因转移事件演化支的基因树（对应表S4）。该手稿标题为《基因组创新与水平基因转移塑造全球流行真菌病原菌的植物定殖与生物质降解策略》，作者依次为Neha Sahu、Boris Indic、Johanna Wong-Bajracharya、Zsolt Merényi、Huei-Mien Ke、Steven Ahrendt、Tori-Lee Monk、Sándor Kocsubé、Elodie Drula、Anna Lipzen、Balázs Bálint、Bernard Henrissat、Bill Andreopoulos、Francis M. Martin、Christoffer Bugge Harder、Daniel Rigling、Kathryn L. Ford、Gary D. Foster、Jasmyn Pangilinan、Alexie Papanicolaou、Kerrie Barry、Kurt LaButti、Máté Virágh、Maxim Koriabine、Mi Yan、Robert Riley、Simang Champramary、Krista L. Plett、Igor V. Grigoriev、Isheng Jason Tsai、Jason Slot、György Sipos、Jonathan Plett、László G. Nagy，发表于预印本平台bioRxiv，预印本编号为2022.11.10.515791，DOI：https://doi.org/10.1101/2022.11.10.515791