A gzipped BED file that contains the hg19 coordinates for which the Orion scores are defined – non-repeat autosomal regions that were covered in our sample.
This R function converts between the 'old' and 'new' stickleback assembly coordinate systems. The 'old' coordinate system is the assembly described in the Jones et al 2012 stickleback genome paper. It
Chromosomal coordinates of Centromere-Like Regions (CLRs) and of sites that did not pass statistical filters (low-confidence, negative control regions (LCNCRs)).
