five

AbcZ

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DataCite Commons2022-05-27 更新2024-08-26 收录
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https://figshare.com/articles/dataset/AbcZ/19323809
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资源简介:
YASARA Structure &amp; WHATIF twinset software v19.7.5 was used to construct this <i>Neisseria gonorrhoeae</i> AbcZ homology model using the hm_build and hm_refine macros. The sequence used to create this model corresponds to <i>abcZ </i>allele 59 (https://pubmlst.org/bigsdb?db=pubmlst_neisseria_seqdef&amp;page=alleleInfo&amp;locus=abcZ&amp;allele_id=59), which is the allele occurring in isolate SRR3360624 (Archived in The Sequence Read Archive at National Center for Biotechnology Information Search database (NCBI SRA) with Accession ID SRR3360624 and in the <i>Neisseria </i>PubMLST database with accession ID 48638). This model is used in the manuscript "A naturally occurring <i>Neisseria gonorrhoeae </i>without a functional <i>abcZ </i>gene" by Hilde Synnøve Vollan, Dominique A. Caugant, Vegard Eldholm, Kristian Alfsnes, Nadia Debech and Ola Brynildsrud.

本研究采用YASARA Structure & WHATIF twinset软件v19.7.5,利用hm_build与hm_refine宏命令,构建了淋病奈瑟菌(*Neisseria gonorrhoeae*)的AbcZ同源建模模型。用于构建该模型的序列对应于abcZ等位基因59型,相关序列信息可通过链接https://pubmlst.org/bigsdb?db=pubmlst_neisseria_seqdef&page=alleleInfo&locus=abcZ&allele_id=59查询。该等位基因存在于分离株SRR3360624中,此分离株已分别存档于美国国家生物技术信息中心(National Center for Biotechnology Information,NCBI)序列读取档案(Sequence Read Archive, SRA,登录号SRR3360624)以及奈瑟菌属公共多位点序列分型(PubMLST)数据库,存档登录号为48638。该模型被应用于Hilde Synnøve Vollan、Dominique A. Caugant、Vegard Eldholm、Kristian Alfsnes、Nadia Debech与Ola Brynildsrud合著的研究手稿《一株天然存在的无功能性abcZ基因的淋病奈瑟菌》。
提供机构:
figshare
创建时间:
2022-03-08
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