TABLE 1 in A Comparative Analysis of Whole Plastid Genomes from the Apiales: Expansion and Contraction of the Inverted Repeat, Mitochondrial to Plastid Transfer of DNA, and Identification of Highly Divergent Noncoding Regions
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TABLE 1. Comparison of assemblies of five Apiales plastid genomes. FeatureAnthriscus cerefoliumCrithmum maritimumHydrocotyle verticillataPetroselinum crispumTiedemannia filiformis subsp. greenamniiTotal no. of non-redundant contigs54142333162219No. of plastid contigs135063148Plastid contig size (bp)241– 68,210120 –19,171110 – 26,905242– 75,5833,130–72,953Average plastid contig size (bp)9,8912,5962,0499,14416,019No. of reads assembled53,255129,820131,88665,60829,867
表1 五个伞形目(Apiales)质体基因组的组装结果比较。 | 统计特征 | 欧洲峨参(Anthriscus cerefolium) | 海茴香(Crithmum maritimum) | 轮生天胡荽(Hydrocotyle verticillata) | 欧芹(Petroselinum crispum) | 细丝蒂氏芹格林亚种(Tiedemannia filiformis subsp. greenamnii) | | ---- | ---- | ---- | ---- | ---- | ---- | | 非冗余重叠群(contig)总数 | 54 | 14 | 23 | 33 | 16 | | 质体重叠群数量 | 22 | 19 | 13 | 5 | 0 | | 质体重叠群长度范围(bp) | 241–68,210 | 120–19,171 | 110–26,905 | 242–75,583 | 3,130–72,953 | | 质体重叠群平均长度(bp) | 9,891 | 2,596 | 2,049 | 9,144 | 16,019 | | 组装读段(read)数量 | 53,255 | 129,820 | 131,886 | 65,608 | 29,867 |



