Comparison of RAxML and FastTree's log likelihoods, and the agreement of FastTree with RAxML's well-supported splits, for large genuine alignments.
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https://figshare.com/articles/dataset/_Comparison_of_RAxML_and_FastTree_s_log_likelihoods_and_the_agreement_of_FastTree_with_RAxML_s_well_supported_splits_for_large_genuine_alignments_/529921
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We ran RAxML with the fast convergence option. All values for COGs are averages over seven families. Log likelihoods for all topologies were computed with RAxML using and GTR or JTT. Global bootstrap values are from using the standard bootstrap with RAxML 7.0.4 (from [11]). SH-like local support values for RAxML's topology were computed with FastTree 2, the CAT approximation, and GTR or JTT.
创建时间：
2010-03-10
