LEMORTHO datasets september 2022

Datasets necessary to reproduce the LEMORTHO benchmark. The dataset used as the reference on LEMOrtho is a customized version of the Orthobench revisited study (https://dx.doi.org/10.1093/gbe/evaa211 , https://dx.doi.org/10.1002/bies.201100062 ), from which we removed a few problematic genes: <code>ENSCAFP00000022898,ENSCINP00000001707, ENSCINP00000002932, ENSCINP00000010295, ENSCINP00000018374, ENSCINP00000025546, ENSCINP00000025552, ENSCINP00000027090, ENSCINP00000035497, ENSDARP00000002330, ENSDARP00000076594, ENSDARP00000131597, ENSDARP00000156542, ENSMODP00000012647, ENSMUSP00000033502, ENSP00000316782, ENSP00000358380, ENSP00000359057, ENSP00000365858, ENSP00000371923, ENSP00000463957, ENSP00000474456, ENSP00000477509, ENSP00000477979, ENSP00000478609, ENSP00000478752, ENSP00000479545, ENSP00000479693, ENSP00000480818, ENSP00000481542, ENSP00000481835, ENSP00000498781, ENSPTRP00000001775, ENSPTRP00000040053, ENSPTRP00000056359, ENSPTRP00000058531, ENSPTRP00000086593, ENSPTRP00000092368, ENSPTRP00000092968, ENSRNOP00000038111, ENSRNOP00000067336, ENSTNIP00000010123, ENSTNIP00000017372, FBpp0073951, FBpp0075520, FBpp0082643, FBpp0082970, FBpp0291496, FBpp0291497, FBpp0309618, WBGene00001184.1, WBGene00001249.1, WBGene00006925.1, WBGene00006926.1, WBGene00006927.1, WBGene00006928.1, WBGene00006929.1, WBGene00006930.1, WBGene00010139.1, WBGene00015237.</code> To use these datasets with the standalone LEMORTHO pipeline, place each dataset in the folder $LEM_ORTHO_ROOT/benchmark/datasets/用于复现LEMORTHO基准测试的必要数据集。作为LEMOrtho参考基准的数据集，为《Orthobench重访》研究的定制化版本，该研究对应两篇文献的DOI链接：https://dx.doi.org/10.1093/gbe/evaa211、https://dx.doi.org/10.1002/bies.201100062；我们已从中移除了一批存在问题的基因：ENSCAFP00000022898、ENSCINP00000001707、ENSCINP00000002932、ENSCINP00000010295、ENSCINP00000018374、ENSCINP00000025546、ENSCINP00000025552、ENSCINP00000027090、ENSCINP00000035497、ENSDARP00000002330、ENSDARP00000076594、ENSDARP00000131597、ENSDARP00000156542、ENSMODP00000012647、ENSMUSP00000033502、ENSP00000316782、ENSP00000358380、ENSP00000359057、ENSP00000365858、ENSP00000371923、ENSP00000463957、ENSP00000474456、ENSP00000477509、ENSP00000477979、ENSP00000478609、ENSP00000478752、ENSP00000479545、ENSP00000479693、ENSP00000480818、ENSP00000481542、ENSP00000481835、ENSP00000498781、ENSPTRP00000001775、ENSPTRP00000040053、ENSPTRP00000056359、ENSPTRP00000058531、ENSPTRP00000086593、ENSPTRP00000092368、ENSPTRP00000092968、ENSRNOP00000038111、ENSRNOP00000067336、ENSTNIP00000010123、ENSTNIP00000017372、FBpp0073951、FBpp0075520、FBpp0082643、FBpp0082970、FBpp0291496、FBpp0291497、FBpp0309618、WBGene00001184.1、WBGene00001249.1、WBGene00006925.1、WBGene00006926.1、WBGene00006927.1、WBGene00006928.1、WBGene00006929.1、WBGene00006930.1、WBGene00010139.1、WBGene00015237。若需在独立版LEMORTHO流程中使用上述数据集，请将每个数据集放置于$LEM_ORTHO_ROOT/benchmark/datasets/ 文件夹内。