Additional file 1 of Transcriptome analysis and characterization of genes associated to leaf tannin content in foxtail millet [Setaria italica (L.) P. Beauv.]

Additional file 1: Supplementary file Table S1. The tannin content in leaves of different foxtail millet varieties. TableS2. Primer sequences used for quantitative real-time PCR. Table S3. Characteristics of the RNA-sequencing data obtained from analysis of 4 leaf samples of foxtail millet. Table S4. GO annotation of the differentially expressed genes shared in all comparisons. Table S5. KEGG pathway annotation and classification of the differentially expressed genes shared in all comparisons. Table S6. The transcription factor (TF) genes predicted using PlantTFDB. Up and down indicate gene is up-regulated and down-regulated in 3 foxtail millet varieties with high leaf tannin content, respectively. Figure S1. Heatmap of pairwise Pearson correlation coefficients (R2) between samples. Figure S2. KEGG analysis of phenylpropanoid pathway in foxtail millet. The pathway map image is obtained from KEGG [1-3].

附加文件1：补充文件。表S1：不同谷子品种叶片中的单宁含量。表S2：实时定量聚合酶链式反应 (quantitative real-time PCR) 所用引物序列。表S3：对4份谷子叶片样本进行RNA测序所得数据的特征信息。表S4：所有比较组中共有的差异表达基因的GO (Gene Ontology) 注释。表S5：所有比较组中共有的差异表达基因的KEGG (Kyoto Encyclopedia of Genes and Genomes) 通路注释与分类。表S6：利用植物转录因子数据库 (PlantTFDB) 预测得到的转录因子 (Transcription Factor, TF) 基因，其中Up和Down分别代表在3个叶片单宁含量高的谷子品种中，基因表达上调与下调。图S1：样本间两两皮尔逊相关系数 (R²) 的热图。图S2：谷子苯丙烷通路的KEGG分析结果，该通路图源自KEGG数据库[1-3]。