Data supporting ‘Examining honeybee (Apis mellifera) dominance patterns within urban bee communities worldwide’

The following repository contains the data and code to reproduce the figures analyses of the paper "Examining honeybee (Apis mellifera) dominance patterns within urban bee communities worldwide". It contains three datasets and one .R file
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The data results from a literature review on abundance distribution of urban bee communities worldwide, aiming at obtaining studies reporting total abundances of honeybees and wildbees in a given city, and species abundances of wildbees and honeybees in a given city.
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1. **Data**:
- *20240308_cities_coords.csv*: the data contains the latitude and longitude of the included cities in the study. It is used for making the world map with the cities.
- *20241201_proportion_HB_WB.csv*: the data contains the total wild bee and honeybee abundances per city/urban aggregation, and the proportions.
- *20241201_rad_bees.csv*: the data contains the species abundances per city/urban aggregation
2. **Script**:
- *HoneybeeDominance_Analyses_Figures.R*: the script to run the analyses and make the plots. Analyses were done in R version 4.2.1, using the packages ggplot2, glmmTMB, multcomp, wesanderson, terra.

本仓库包含用于复现论文《全球城市蜂类群落中西方蜜蜂（Apis mellifera）优势格局研究》的图表与分析所需的数据与代码，共收录3个数据集与1个R脚本文件。

本数据集源自一项针对全球城市蜂类群落丰度分布的文献综述，旨在筛选出同时报告了特定城市中蜜蜂与野生蜂总个体数，以及该城市内野生蜂与蜜蜂物种种群丰度的相关研究。

1. **数据文件**：
- *20240308_cities_coords.csv*：该数据集收录了本研究纳入的所有城市的经纬度坐标，用于绘制标注研究城市的全球地图。
- *20241201_proportion_HB_WB.csv*：该数据集包含各城市/城市集聚区的野生蜂与蜜蜂总个体数及其占比数据。
- *20241201_rad_bees.csv*：该数据集包含各城市/城市集聚区的物种种群丰度数据。

2. **分析脚本**：
- *HoneybeeDominance_Analyses_Figures.R*：用于执行统计分析与生成可视化图表的脚本。本分析基于R 4.2.1版本完成，所使用的R扩展包包括ggplot2、glmmTMB、multcomp、wesanderson及terra。