Additional file 4: of Walking pathways with positive feedback loops reveal DNA methylation biomarkers of colorectal cancer

Table S9. List of 71 genes encoding TFs linked to PWMs that were found overrepresented in the genomic regions around CpGs whose methylation was negatively of positively correlated with gene expression. These TF genes were identified independently by three independent algorithms: by classical CMA analysis (of NEG and POS sets versus control), by CMAcorrel as well as by F-Match of enriched single PWMs. (XLSX 76 kb)表S9：71个编码转录因子（Transcription Factors, TFs）的基因列表，这些基因关联的位置权重矩阵（Position Weight Matrices, PWMs）在甲基化水平与基因表达呈负相关或正相关的CpG位点周围的基因组区域中显著富集。该批转录因子基因通过三种独立算法完成鉴定：经典CMA分析（对比NEG组、POS组与对照组）、CMAcorrel算法，以及针对富集单一位点权重矩阵的F-Match算法。（XLSX格式，文件大小76 KB）